RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 GRID2O43424 1007 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 TLX3O43711 291 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-219ENST00000580540 NUDT21O43809 227 aaKnown RBP16.46■□□□□ 0.23
SREBF1-219ENST00000580540 SNX2O60749 519 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 MTX2O75431 263 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 ZNF8P17098 575 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-219ENST00000580540 HMGCLP35914 325 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 LSSP48449 732 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 OR1D5P58170 312 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 OLIG2Q13516 323 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 LRP8Q14114 963 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 CRTC3Q6UUV7 619 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 ARHGEF18Q6ZSZ5 1173 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 SPRED1Q7Z699 444 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 PHYKPLQ8IUZ5 450 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 NAGSQ8N159 534 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 TTC30BQ8N4P2 665 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 FAM71DQ8N9W8 422 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 FGF11Q92914 225 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 GRAMD1AQ96CP6 724 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 CARD9Q9H257 536 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 RMI1Q9H9A7 625 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 TRIM39Q9HCM9 518 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 LZTFL1Q9NQ48 299 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 R3HDM2Q9Y2K5 976 aaKnown RBP16.46■□□□□ 0.23
SREBF1-219ENST00000580540 AAR2Q9Y312 384 aaKnown RBP16.46■□□□□ 0.23
SREBF1-219ENST00000580540 PKP3Q9Y446 797 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 ANKRD11Q6UB99 2663 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-219ENST00000580540 UNC13CQ8NB66 2214 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 D6RAR5 112 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 STX7O15400 261 aaKnown RBP16.45■□□□□ 0.22
SREBF1-219ENST00000580540 NUAK1O60285 661 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 PNLIPP16233 465 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 RBMS1P29558 406 aaKnown RBP16.45■□□□□ 0.22
SREBF1-219ENST00000580540 SPARCL1Q14515 664 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 PLA2G4EQ3MJ16 856 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 ATP13A5Q4VNC0 1218 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 PDPK2PQ6A1A2 396 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 FAM151BQ6UXP7 276 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 B3GNT8Q7Z7M8 397 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 ADGRG6Q86SQ4 1221 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 LSMEM2Q8N112 164 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 TAB3Q8N5C8 712 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-219ENST00000580540 PLEKHG4BQ96PX9 1271 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 GORASP1Q9BQQ3 440 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 STRADBQ9C0K7 418 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 IL17CQ9P0M4 197 aa16.45■□□□□ 0.22
SREBF1-219ENST00000580540 NFKBIL1Q9UBC1 381 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-219ENST00000580540 ZW10O43264 779 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 B4GAT1O43505 415 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 NRDCO43847 1150 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 CCDC175P0C221 793 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 SPAM1P38567 509 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 PDX1P52945 283 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 INHBCP55103 352 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 B4GALNT1Q00973 533 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 PTPRCAPQ14761 206 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 RPS6KA1Q15418 735 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 CHRNA6Q15825 494 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 TBC1D25Q3MII6 688 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 MAP9Q49MG5 647 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 ZDHHC20Q5W0Z9 365 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 LRRC69Q6ZNQ3 347 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 USP53Q70EK8 1073 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 C17orf82Q86X59 251 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-219ENST00000580540 LRRC8AQ8IWT6 810 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 WDR36Q8NI36 951 aaKnown RBP16.44■□□□□ 0.22
SREBF1-219ENST00000580540 LRRC45Q96CN5 670 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 NAF1Q96HR8 494 aaKnown RBP16.44■□□□□ 0.22
SREBF1-219ENST00000580540 TMEM74Q96NL1 305 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 TBL1YQ9BQ87 522 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 OSGEPL1Q9H4B0 414 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 RDH14Q9HBH5 336 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 IL26Q9NPH9 171 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 KLC4Q9NSK0 619 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 RALYQ9UKM9 306 aaKnown RBP16.44■□□□□ 0.22
SREBF1-219ENST00000580540 ARL5AQ9Y689 179 aa16.44■□□□□ 0.22
SREBF1-219ENST00000580540 KIF26BQ2KJY2 2108 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 CCDC187A0A096LP49 1063 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 GLYATL1P3A0A0U1RQE8 302 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 PMS2P1A4D2B8 440 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 C5orf60A6NFR6 353 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 TMX2-CTNND1H3BSU7 103 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 PPM1DO15297 605 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 RRP8O43159 456 aaKnown RBP16.43■□□□□ 0.22
SREBF1-219ENST00000580540 UGT1A9O60656 530 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 ZNF189O75820 626 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-219ENST00000580540 CDK14O94921 469 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 EML2O95834 649 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 UGT1A6P19224 532 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 UGT1A1P22309 533 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 UGT1A4P22310 534 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 ADRA1AP35348 466 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 UGT1A3P35503 534 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 UGT1A5P35504 534 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 CCDC173Q0VFZ6 552 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 KLF1Q13351 362 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-219ENST00000580540 GTF2H3Q13889 308 aa16.43■□□□□ 0.22
SREBF1-219ENST00000580540 INSCQ1MX18 579 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms