RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ANP32EQ9BTT0 268 aa14.51□□□□□ -0.09
FANCA-220ENST00000566409 STRADBQ9C0K7 418 aa14.51□□□□□ -0.09
FANCA-220ENST00000566409 ATXN10Q9UBB4 475 aa14.51□□□□□ -0.09
FANCA-220ENST00000566409 NFKBIL1Q9UBC1 381 aaPredicted RBP14.51□□□□□ -0.09
FANCA-220ENST00000566409 TBC1D29Q9UFV1 150 aa14.51□□□□□ -0.09
FANCA-220ENST00000566409 FAM153AQ9UHL3 310 aa14.51□□□□□ -0.09
FANCA-220ENST00000566409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.51□□□□□ -0.09
FANCA-220ENST00000566409 A6NCN8 305 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 BTNL10A8MVZ5 291 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 APOC4-APOC2K7ER74 178 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 PJA2O43164 708 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 CPNE6O95741 557 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 APOC2P02655 101 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 ITIH1P19827 911 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 RBL1P28749 1068 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 ETV5P41161 510 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 MLLT3P42568 568 aaPredicted RBP14.5□□□□□ -0.09
FANCA-220ENST00000566409 EIF3IQ13347 325 aaKnown RBP14.5□□□□□ -0.09
FANCA-220ENST00000566409 C16orf72Q14CZ0 275 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 KHDC1Q4VXA5 237 aaKnown RBP14.5□□□□□ -0.09
FANCA-220ENST00000566409 SIRPB2Q5JXA9 342 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 AADACL2Q6P093 401 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 PID1Q7Z2X4 250 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 PIM3Q86V86 326 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 SFRP1Q8N474 314 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 TTC30BQ8N4P2 665 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 TRAM1L1Q8N609 369 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 SLC37A2Q8TED4 501 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 FCRL3Q96P31 734 aaPredicted RBP14.5□□□□□ -0.09
FANCA-220ENST00000566409 SPATA16Q9BXB7 569 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 GPR63Q9BZJ6 419 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 CPNE5Q9HCH3 593 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 BPIFA1Q9NP55 256 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 LUC7LQ9NQ29 371 aaKnown RBP14.5□□□□□ -0.09
FANCA-220ENST00000566409 KLHL8Q9P2G9 620 aaPredicted RBP14.5□□□□□ -0.09
FANCA-220ENST00000566409 KCNK6Q9Y257 313 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 LOXL2Q9Y4K0 774 aa14.5□□□□□ -0.09
FANCA-220ENST00000566409 HELZ2Q9BYK8 2649 aaKnown RBP14.49□□□□□ -0.09
FANCA-220ENST00000566409 IGHV1OR21-1A0A087WYE8 117 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 GRID2IPA4D2P6 1211 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 HACD1B0YJ81 288 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 KLK10O43240 276 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 MTSS1O43312 755 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 GRID2O43424 1007 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 SLC25A14O95258 325 aaPredicted RBP14.49□□□□□ -0.09
FANCA-220ENST00000566409 EPOP01588 193 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 PYGMP11217 842 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 ACP5P13686 325 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 SLC5A2P31639 672 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 CSF2RBP32927 897 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 CA5AP35218 305 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 GPR3P46089 330 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 FASLGP48023 281 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 VAV2P52735 878 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 COPS2P61201 443 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 XRCC4Q13426 336 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 SQSTM1Q13501 440 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.49□□□□□ -0.09
FANCA-220ENST00000566409 ADGRG6Q86SQ4 1221 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 ZNF761Q86XN6 746 aaPredicted RBP14.49□□□□□ -0.09
FANCA-220ENST00000566409 SLC25A41Q8N5S1 370 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 ACTL9Q8TC94 416 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 GLYATL1Q969I3 302 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 VAT1Q99536 393 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 FAM118BQ9BPY3 351 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 ZSCAN5AQ9BUG6 496 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 DPH1Q9BZG8 443 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 OR2AG1Q9H205 316 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 CARD9Q9H257 536 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 RMI1Q9H9A7 625 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 TRIM39Q9HCM9 518 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 TMEM9Q9P0T7 183 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 PISDQ9UG56 409 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 SLC23A2Q9UGH3 650 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 PCDHGA7Q9Y5G6 932 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 SDK2Q58EX2 2172 aa14.49□□□□□ -0.09
FANCA-220ENST00000566409 IGHV5-10-1A0A0J9YXX1 117 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 CHUKO15111 745 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 MTX2O75431 263 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 CTNNA2P26232 953 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 PTPN7P35236 360 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 HMGCLP35914 325 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 CXADRP78310 365 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 OTUD4Q01804 1114 aaKnown RBP14.48□□□□□ -0.09
FANCA-220ENST00000566409 CLN3Q13286 438 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 PEX6Q13608 980 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 SLC1A5Q15758 541 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 MAP9Q49MG5 647 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 ATP13A5Q4VNC0 1218 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 ZNF569Q5MCW4 686 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 PHF19Q5T6S3 580 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 PDPK2PQ6A1A2 396 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 CCDC70Q6NSX1 233 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 IYDQ6PHW0 289 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 ZNF547Q8IVP9 402 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 RCBTB1Q8NDN9 531 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 IPMKQ8NFU5 416 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 BAG1Q99933 345 aaPredicted RBP14.48□□□□□ -0.09
FANCA-220ENST00000566409 OSBPL8Q9BZF1 889 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 IL26Q9NPH9 171 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms