RNA–Protein interactions for RNA: ENST00000561050.5

PCK2-215, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, human

TSL 2

Gene PCK2, Length 1,856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCK2-215	ENST00000561050	TYK2	P29597	1187 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	FMO4	P31512	558 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	TPMT	P51580	245 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	SLC18A1	P54219	525 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	ZXDA	P98168	799 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	POU4F1	Q01851	419 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	CCDC15	Q0P6D6	951 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	USP10	Q14694	798 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	TMEM259	Q4ZIN3	620 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	AARS2	Q5JTZ9	985 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	TMEM207	Q6UWW9	146 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	GPATCH11	Q8N954	259 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	AP2M1	Q96CW1	435 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	SMC6	Q96SB8	1091 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	SPATA16	Q9BXB7	569 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	C1QTNF2	Q9BXJ5	285 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	ZNF106	Q9H2Y7	1883 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	SLC35E2B	P0CK96	405 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	RPA3	P35244	121 aa	Predicted RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	ZNF460	Q14592	562 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	KHDC1	Q4VXA5	237 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	RNF187	Q5TA31	235 aa	Predicted RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	CLEC14A	Q86T13	490 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	PLD6	Q8N2A8	252 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	PJA1	Q8NG27	643 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	OR14C36	Q8NHC7	312 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	CXorf40A	Q8TE69	158 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	ALKBH8	Q96BT7	664 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	C1QTNF1	Q9BXJ1	281 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	USP36	Q9P275	1121 aa	Known RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	GALP	Q9UBC7	116 aa		18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	CORO1C	Q9ULV4	474 aa	Predicted RBP	18.84	■□□□□ 0.61
PCK2-215	ENST00000561050	LRRK1	Q38SD2	2015 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	PHGDH	O43175	533 aa	Known RBP	18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	LZTS3	O60299	673 aa	Predicted RBP	18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	PCDH8	O95206	1070 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	IGLV3-19	P01714	112 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	FDXR	P22570	491 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	ACSL1	P33121	698 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	SERPINB8	P50452	374 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	ATP1A2	P50993	1020 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	ITGA9	Q13797	1035 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	GPRC6A	Q5T6X5	926 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	LYPLAL1	Q5VWZ2	237 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	KBTBD6	Q86V97	674 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	CLDN19	Q8N6F1	224 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	GANC	Q8TET4	914 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	BTN2A2	Q8WVV5	523 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	HMGB4	Q8WW32	186 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	ELMO2	Q96JJ3	720 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	VPS35	Q96QK1	796 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	ZSCAN5A	Q9BUG6	496 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	CHRD	Q9H2X0	955 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	MKS1	Q9NXB0	559 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	ZDHHC3	Q9NYG2	299 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050	CRLS1	Q9UJA2	301 aa		18.83	■□□□□ 0.6
PCK2-215	ENST00000561050		A0A096LPK6	155 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	PRMT5	O14744	637 aa	Predicted RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	ATG13	O75143	517 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	PKM	P14618	531 aa	Known RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	SAT1	P21673	171 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	RPS3	P23396	243 aa	Known RBP eCLIP	18.82	■□□□□ 0.6	2e-9	■■□□□ 13.6
PCK2-215	ENST00000561050	CRHR1	P34998	444 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	WDR4	P57081	412 aa	Known RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	RAB10	P61026	200 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	WSCD2	Q2TBF2	565 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	TMEM31	Q5JXX7	168 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	PLA2G15	Q8NCC3	412 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	NUS1	Q96E22	293 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	SLC13A1	Q9BZW2	595 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	POLM	Q9NP87	494 aa	Predicted RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	VPS9D1	Q9Y2B5	631 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	UBA6	A0AVT1	1052 aa	Predicted RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	SGTA	O43765	313 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	TM7SF2	O76062	418 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	CD9	P21926	228 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	ETV4	P43268	484 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	IRF9	Q00978	393 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	ILF2	Q12905	390 aa	Known RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	ITIH4	Q14624	930 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	ZNF284	Q2VY69	593 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	TTC31	Q49AM3	519 aa	Predicted RBP	18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	TCP10L	Q8TDR4	215 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	18.82	■□□□□ 0.6	7e-8	■■■■□ 26.2
PCK2-215	ENST00000561050	APOPT1	Q96IL0	206 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	UBXN10	Q96LJ8	280 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	GPR78	Q96P69	363 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	KCNK9	Q9NPC2	374 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	PCMTD2	Q9NV79	361 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	ZNF358	Q9NW07	568 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050	SLC17A7	Q9P2U7	560 aa		18.82	■□□□□ 0.6
PCK2-215	ENST00000561050		A0A1W2PQU0	124 aa		18.81	■□□□□ 0.6
PCK2-215	ENST00000561050	FAM47DP	A6NHR8	397 aa		18.81	■□□□□ 0.6
PCK2-215	ENST00000561050	IQCF5	A8MTL0	148 aa		18.81	■□□□□ 0.6
PCK2-215	ENST00000561050	DNAJC6	O75061	913 aa		18.81	■□□□□ 0.6
PCK2-215	ENST00000561050	PAK4	O96013	591 aa	Predicted RBP	18.81	■□□□□ 0.6
PCK2-215	ENST00000561050	ESR1	P03372	595 aa		18.81	■□□□□ 0.6
PCK2-215	ENST00000561050	MPO	P05164	745 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms