RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 CAPGP40121 348 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 PBX3P40426 434 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 SFSWAPQ12872 951 aaKnown RBP11.42□□□□□ -0.58
DDB1-224ENST00000545894 GRB7Q14451 532 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 RAB39AQ14964 217 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 UPP1Q16831 310 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 GEN1Q17RS7 908 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 COQ5Q5HYK3 327 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 MANEALQ5VSG8 457 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 GPR107Q5VW38 600 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 PHYKPLQ8IUZ5 450 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 DHRSXQ8N5I4 330 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 PNPLA1Q8N8W4 532 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 OR13J1Q8NGT2 312 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 GIPC3Q8TF64 312 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 TWIST2Q8WVJ9 160 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 BORCS5Q969J3 196 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 PTERQ96BW5 349 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 MUC13Q9H3R2 512 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 POLR1BQ9H9Y6 1135 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 CSNK1G1Q9HCP0 422 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 MID1IP1Q9NPA3 183 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 SDR39U1Q9NRG7 319 aaPredicted RBP11.42□□□□□ -0.58
DDB1-224ENST00000545894 NDFIP2Q9NV92 336 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 SMPD3Q9NY59 655 aaPredicted RBP11.42□□□□□ -0.58
DDB1-224ENST00000545894 GIMAP2Q9UG22 337 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 DSEQ9UL01 958 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 YBX2Q9Y2T7 364 aaKnown RBP11.42□□□□□ -0.58
DDB1-224ENST00000545894 SH3GLB1Q9Y371 365 aa11.42□□□□□ -0.58
DDB1-224ENST00000545894 F8W810 466 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 AZIN1O14977 448 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 IRAK2O43187 625 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 CBFA2T3O75081 653 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 PAGE1O75459 146 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 CLIC3O95833 236 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 S1PR4O95977 384 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 GALTP07902 379 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 LBPP18428 481 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 ETFBP38117 255 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 OR1G1P47890 313 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 SLC11A1P49279 550 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 RAB15P59190 212 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 RPS6KA2Q15349 733 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 CYP51A1Q16850 503 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 ZNF829Q3KNS6 432 aaPredicted RBP11.41□□□□□ -0.58
DDB1-224ENST00000545894 BRMS1LQ5PSV4 323 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
DDB1-224ENST00000545894 PIM3Q86V86 326 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 DDIASQ8IXT1 998 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 PTGR2Q8N8N7 351 aaPredicted RBP11.41□□□□□ -0.58
DDB1-224ENST00000545894 OR6P1Q8NGX9 317 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 EXT2Q93063 718 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 MYLPFQ96A32 169 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 VPS50Q96JG6 964 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 TRIM62Q9BVG3 475 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 YTHDF1Q9BYJ9 559 aaKnown RBP11.41□□□□□ -0.58
DDB1-224ENST00000545894 PAIP1Q9H074 479 aaKnown RBP11.41□□□□□ -0.58
DDB1-224ENST00000545894 SLC25A51Q9H1U9 297 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 ATP13A1Q9HD20 1204 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 PCDHA9Q9Y5H5 950 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 PTGDR2Q9Y5Y4 395 aa11.41□□□□□ -0.58
DDB1-224ENST00000545894 NT5C1B-RDH14C9J2C7 533 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 C9JVG2 144 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 TMX2-CTNND1H3BSU7 103 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 INPP4BO15327 924 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CHRM3P20309 590 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 TPP2P29144 1249 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 RPL9P32969 192 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 RPS9P46781 194 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 EIF4EBP2Q13542 120 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 ANKDD1AQ495B1 522 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 SPOUT1Q5T280 376 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 AFMIDQ63HM1 303 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 KANK2Q63ZY3 851 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CD300LGQ6UXG3 332 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 TMEM26Q6ZUK4 368 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 LDB1Q86U70 411 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 LRRC49Q8IUZ0 686 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 OFCC1Q8IZS5 231 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 SCML4Q8N228 414 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 C3orf58Q8NDZ4 430 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 OR52K2Q8NGK3 314 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 TUBGCP3Q96CW5 907 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 FCRL2Q96LA5 508 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 UROC1Q96N76 676 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CYP2S1Q96SQ9 504 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 TMEM175Q9BSA9 504 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 PBX4Q9BYU1 374 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 TRIM54Q9BYV2 358 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 MFSD1Q9H3U5 465 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 PKD2L2Q9NZM6 624 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 COLQQ9Y215 455 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 A0A1W2PPW3 197 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 KANSL1LA0AUZ9 987 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 PPP6CO00743 305 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 FOXD2O60548 495 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 ALDH2P05091 517 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 ITGB1P05556 798 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 HGFP14210 728 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms