RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FAM45BPQ6NSW5 357 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 CHSY3Q70JA7 882 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 AMIGO2Q86SJ2 522 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 BBS5Q8N3I7 341 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 SMYD1Q8NB12 490 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 FAM45AQ8TCE6 357 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 FEM1CQ96JP0 617 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 LRGUKQ96M69 825 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 SERPINI1Q99574 410 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 ERVK-6Q9BXR3 956 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 TM6SF2Q9BZW4 377 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 LIN28AQ9H9Z2 209 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 RIMS3Q9UJD0 308 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 PRPF19Q9UMS4 504 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 FCF1Q9Y324 198 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 XIRP2A4UGR9 3374 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 MRASO14807 208 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 INSIG1O15503 277 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ALPIP09923 528 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 POLD2P49005 469 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 SLC7A2P52569 658 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 CYTH1Q15438 398 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 AAK1Q2M2I8 961 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 MRNIPQ6NTE8 343 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 LARP4Q71RC2 724 aaKnown RBP eCLIP14.68□□□□□ -0.06
DDX55-209ENST00000542286 WFDC5Q8TCV5 224 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 TWIST2Q8WVJ9 160 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 LRTOMTQ8WZ04 291 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 LPGAT1Q92604 370 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 TEX37Q96LM6 180 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 AARSD1Q9BTE6 412 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 EML4Q9HC35 981 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 EGFL7Q9UHF1 273 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 DNMT3LQ9UJW3 386 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 WDR37Q9Y2I8 494 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 DOCK6Q96HP0 2047 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ZNF840PA6NDX5 716 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ARVCFO00192 962 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 BTN3A1O00481 513 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 TBC1D4O60343 1298 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ECI2O75521 394 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 STC2O76061 302 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 NDST3O95803 873 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 RPLP2P05387 115 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 RHOCP08134 193 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ZDHHC11BP0C7U3 371 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 HLA-DPA1P20036 260 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 TWF1Q12792 350 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ZRANB3Q5FWF4 1079 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ATOH8Q96SQ7 321 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 C1orf50Q9BV19 199 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ABCG8Q9H221 673 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 PIF1Q9H611 641 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 SCUBE2Q9NQ36 999 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 OLA1Q9NTK5 396 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 TBCCD1Q9NVR7 557 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 RNF112Q9ULX5 631 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 RAI2Q9Y5P3 530 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 ZNF140P52738 457 aaPredicted RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 PHEXP78562 749 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 ZXDBP98169 803 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 TRAF2Q12933 501 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 RARS2Q5T160 578 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 NCCRP1Q6ZVX7 275 aaPredicted RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 ERI1Q8IV48 349 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 CARNMT1Q8N4J0 409 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 VPS33AQ96AX1 596 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 TUBGCP3Q96CW5 907 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 PPP1R2P1Q96PQ5 205 aa14.68□□□□□ -0.06
DDX55-209ENST00000542286 RSL24D1Q9UHA3 163 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 AGO1Q9UL18 857 aaKnown RBP14.68□□□□□ -0.06
DDX55-209ENST00000542286 TPST1O60507 370 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 CD160O95971 181 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 SNRPB2P08579 225 aaKnown RBP14.67□□□□□ -0.06
DDX55-209ENST00000542286 CAPN3P20807 821 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 MC4RP32245 332 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 ARL1P40616 181 aaPredicted RBP14.67□□□□□ -0.06
DDX55-209ENST00000542286 STT3AP46977 705 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 MAPKAPK2P49137 400 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 YBEYP58557 167 aaPredicted RBP14.67□□□□□ -0.06
DDX55-209ENST00000542286 ARF5P84085 180 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 ADGRE1Q14246 886 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 CPNE9Q8IYJ1 553 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 EEF1AKMT1Q8WVE0 214 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 SLC35B4Q969S0 331 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 PFDN4Q9NQP4 134 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 INIPQ9NRY2 104 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 ZNF839A8K0R7 811 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 NDUFS3O75489 264 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 BCAS2O75934 225 aaPredicted RBP14.67□□□□□ -0.06
DDX55-209ENST00000542286 CASP2P42575 452 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 PLIN5Q00G26 463 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 ACVR1Q04771 509 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 SQLEQ14534 574 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 USP41Q3LFD5 358 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 Q6ZNX1 250 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 EID2BQ96D98 161 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 PSKH2Q96QS6 385 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms