RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TPBGLP0DKB5 382 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 ARSAP15289 507 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 AOC1P19801 751 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 CHRM3P20309 590 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 ITGALP20701 1170 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 LHCGRP22888 699 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 HNRNPH1P31943 449 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 SPAM1P38567 509 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 PTSQ03393 145 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 TBCCQ15814 346 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 SH2D4BQ5SQS7 431 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 GRAMD4Q6IC98 578 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 GDPD4Q6W3E5 623 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 RFLNAQ6ZTI6 216 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 USP45Q70EL2 814 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 NKAPQ8N5F7 415 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 PTGR2Q8N8N7 351 aaPredicted RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 ST13P5Q8NFI4 369 aaPredicted RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 EEF1AKMT1Q8WVE0 214 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 CADM1Q9BY67 442 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 PBX4Q9BYU1 374 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 MTG2Q9H4K7 406 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 SFXN1Q9H9B4 322 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 TAS2R1Q9NYW7 299 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 TAGLN3Q9UI15 199 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 PIKFYVEQ9Y2I7 2098 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 E9PBE3 544 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 SLCO1B7G3V0H7 640 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 NEMP1O14524 444 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 KLHL41O60662 606 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 KERAO60938 352 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 SNUPNO95149 360 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 NCF2P19878 526 aaPredicted RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 EPHA3P29320 983 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 DGKGP49619 791 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 CLCN7P51798 805 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 ATP6V0D1P61421 351 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 TSNQ15631 228 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 RARS2Q5T160 578 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 ZFYVE19Q96K21 471 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 ASB16Q96NS5 453 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 APOL5Q9BWW9 433 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 SARS2Q9NP81 518 aaKnown RBP16.72■□□□□ 0.27
SREK1-212ENST00000522912 TCF7L2Q9NQB0 619 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 GTSE1Q9NYZ3 720 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 PRSS21Q9Y6M0 314 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 WASF2Q9Y6W5 498 aa16.72■□□□□ 0.27
SREK1-212ENST00000522912 CEP290O15078 2479 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 NPEPPSL1A6NEC2 478 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 LRRC14BA6NHZ5 514 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 E5RI56 91 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 UBFD1O14562 309 aaKnown RBP16.71■□□□□ 0.27
SREK1-212ENST00000522912 HOXC11O43248 304 aaPredicted RBP16.71■□□□□ 0.27
SREK1-212ENST00000522912 ACRV1P26436 265 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 RECQLP46063 649 aaPredicted RBP16.71■□□□□ 0.27
SREK1-212ENST00000522912 HERVK_113P63132 956 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 KDSRQ06136 332 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 MESP2Q0VG99 397 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 PDCD2Q16342 344 aaPredicted RBP16.71■□□□□ 0.27
SREK1-212ENST00000522912 PFKFB4Q16877 469 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 LSM12Q3MHD2 195 aaKnown RBP16.71■□□□□ 0.27
SREK1-212ENST00000522912 CUZD1Q86UP6 607 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 CPNE9Q8IYJ1 553 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 PHTF2Q8N3S3 785 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 FBXO27Q8NI29 283 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 STAG3L4Q8TBR4 150 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 FGF13Q92913 245 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 HEPHQ9BQS7 1158 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 ERVK-6Q9BXR3 956 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 CIPCQ9C0C6 399 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 B4GALT6Q9UBX8 382 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 RNF112Q9ULX5 631 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 PCDHB1Q9Y5F3 818 aa16.71■□□□□ 0.27
SREK1-212ENST00000522912 C5orf42Q9H799 3197 aa16.71■□□□□ 0.26
SREK1-212ENST00000522912 GOLGA8CPA6NN73 597 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 ECI2O75521 394 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 SUPT7LO94864 414 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 SIX3O95343 332 aaPredicted RBP16.7■□□□□ 0.26
SREK1-212ENST00000522912 ADH1CP00326 375 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 C1SP09871 688 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 ZNF7P17097 686 aaPredicted RBP16.7■□□□□ 0.26
SREK1-212ENST00000522912 TSPAN8P19075 237 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 RPS3P23396 243 aaKnown RBP eCLIP16.7■□□□□ 0.26
SREK1-212ENST00000522912 FSHRP23945 695 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 IL2P60568 153 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 GALNT1Q10472 559 aaPredicted RBP16.7■□□□□ 0.26
SREK1-212ENST00000522912 FAM219BQ5XKK7 198 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 RBFAQ8N0V3 343 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 TEX9Q8N6V9 391 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 KIAA1958Q8N8K9 716 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 BPIFB1Q8TDL5 484 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 SMARCD2Q92925 531 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 FUBP1Q96AE4 644 aaKnown RBP16.7■□□□□ 0.26
SREK1-212ENST00000522912 LINGO1Q96FE5 620 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 CLPBQ9H078 707 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 LMAN2LQ9H0V9 348 aa16.7■□□□□ 0.26
SREK1-212ENST00000522912 EML4Q9HC35 981 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms