RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 A0A087WV48 116 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 OR6C68A6NDL8 312 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 HIDE1A8MVS5 230 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CEP104O60308 925 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 BEST1O76090 585 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 EPN2O95208 641 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 IPO7O95373 1038 aaKnown RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 C6P13671 934 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ENGP17813 658 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 SFPQP23246 707 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ITPKBP27987 946 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 STAT6P42226 847 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 GRIA3P42263 894 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CCR3P51677 355 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 RIPK4P57078 832 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 GSTO1P78417 241 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ROR1Q01973 937 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MECOMQ03112 1051 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 NIPAL4Q0D2K0 466 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CSTF3Q12996 717 aaKnown RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 KCNC3Q14003 757 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ICAM4Q14773 271 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 PLCB4Q15147 1175 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 NTRK2Q16620 822 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 EDRF1Q3B7T1 1238 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM153CQ494X1 144 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 SH2D4BQ5SQS7 431 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 VWA5B1Q5TIE3 1220 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 HIST2H2BCQ6DN03 193 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 KCNV1Q6PIU1 500 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ATG9AQ7Z3C6 839 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 NEK8Q86SG6 692 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 KLBQ86Z14 1044 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 VPS52Q8N1B4 723 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 LCORLQ8N3X6 602 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM47BQ8NA70 645 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 POMGNT2Q8NAT1 580 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM116Q8NCL8 245 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 DNAAF1Q8NEP3 725 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CADM4Q8NFZ8 388 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 APBB2Q92870 758 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 DAZAP1Q96EP5 407 aaKnown RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 PRR11Q96HE9 360 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 RADILQ96JH8 1075 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 Q96MF0 132 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 COQ10AQ96MF6 247 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CMTM3Q96MX0 182 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZMAT2Q96NC0 199 aaKnown RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 TEFMQ96QE5 360 aaKnown RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 FRG2BQ96QU4 278 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CTAGE1Q96RT6 745 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CENPOQ9BU64 300 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 IFT27Q9BW83 186 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 HDHD5Q9BXW7 423 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 KLC2Q9H0B6 622 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 TCP11L1Q9NUJ3 509 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 GIMAP4Q9NUV9 329 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MRPL15Q9P015 296 aaKnown RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MARCH4Q9P2E8 410 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 PCDHGB4Q9UN71 923 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 DTX4Q9Y2E6 619 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 CLDN16Q9Y5I7 305 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 SESN1Q9Y6P5 492 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 DNHD1Q96M86 4753 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZMYM2Q9UBW7 1377 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 MGAQ8IWI9 3026 aa4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 FNDC1Q4ZHG4 1894 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P23-201ENST00000518743 F5P12259 2224 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 NBASA2RRP1 2371 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 OTOL1A6NHN0 477 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 DBX1A6NMT0 343 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 GALTP07902 379 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CCDC192P0DO97 292 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 HKR1P10072 659 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 KRT10P13645 584 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CFPP27918 469 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADSSP30520 456 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CLK3P49761 638 aaKnown RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 COPB1P53618 953 aaKnown RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 IFI35P80217 286 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ABHD18Q0P651 414 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM115Q12893 351 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 LRMPQ12912 555 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 KCNB1Q14721 858 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PPP2R5BQ15173 497 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 HIST2H2ACQ16777 129 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PFKFB3Q16875 520 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM266Q2M3C6 531 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 AP5B1Q2VPB7 878 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 LETM2Q2VYF4 491 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PCID2Q5JVF3 399 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 KIAA1755Q5JYT7 1200 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 C10orf76Q5T2E6 689 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM171A1Q5VUB5 890 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms