RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 DPCR1Q3MIW9 517 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 C6orf141Q5SZD1 244 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 METTL2BQ6P1Q9 378 aaKnown RBP5.66□□□□□ -1.5
LINC01088-208ENST00000511895 SPSB3Q6PJ21 355 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.66□□□□□ -1.53e-9■■■□□ 16.8
LINC01088-208ENST00000511895 KRBA2Q6ZNG9 492 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 WDR63Q8IWG1 891 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 UCMAQ8WVF2 138 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 INTS12Q96CB8 462 aaKnown RBP5.66□□□□□ -1.5
LINC01088-208ENST00000511895 IGSF21Q96ID5 467 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 METTL2AQ96IZ6 378 aaKnown RBP5.66□□□□□ -1.5
LINC01088-208ENST00000511895 SLC41A2Q96JW4 573 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 FAM84BQ96KN1 310 aaPredicted RBP5.66□□□□□ -1.5
LINC01088-208ENST00000511895 DUX5Q96PT3 197 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 FAM110AQ9BQ89 295 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 TMEM47Q9BQJ4 181 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 RETREG1Q9H6L5 497 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 PPP1R3EQ9H7J1 279 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 LRRC37A3O60309 1634 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 KANK1Q14678 1352 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 TTC28Q96AY4 2481 aa5.66□□□□□ -1.5
LINC01088-208ENST00000511895 SSH2Q76I76 1423 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 CLGNO14967 610 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 TGFB1I1O43294 461 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 TIPRLO75663 272 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 SRCP12931 536 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 DDX5P17844 614 aaKnown RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 MAOAP21397 527 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 RAD23BP54727 409 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 EEF1A2Q05639 463 aaKnown RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 COASYQ13057 564 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 TNFAIP1Q13829 316 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 USP41Q3LFD5 358 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 SETMARQ53H47 684 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 KCTD18Q6PI47 426 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 CCNI2Q6ZMN8 369 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 DCP1BQ8IZD4 617 aaKnown RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 FAM149B1Q96BN6 582 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 LMLNQ96KR4 655 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 SH3GL2Q99962 352 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 SLC28A3Q9HAS3 691 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 SMARCAL1Q9NZC9 954 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 LIMA1Q9UHB6 759 aaKnown RBP5.65□□□□□ -1.5
LINC01088-208ENST00000511895 SIX4Q9UIU6 781 aa5.65□□□□□ -1.5
LINC01088-208ENST00000511895 THSD7BQ9C0I4 1608 aa5.65□□□□□ -1.51
LINC01088-208ENST00000511895 LTBP1Q14766 1721 aa5.65□□□□□ -1.51
LINC01088-208ENST00000511895 AKAP12Q02952 1782 aa5.65□□□□□ -1.51
LINC01088-208ENST00000511895 SMTNL1A8MU46 457 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 NKX2-2O95096 273 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 PMS2P2O95744 297 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 CD4P01730 458 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 ZNF182P17025 639 aaPredicted RBP5.64□□□□□ -1.51
LINC01088-208ENST00000511895 DDIT3P35638 169 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 RGS2P41220 211 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 GAS1P54826 345 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 RPS3AP61247 264 aaKnown RBP5.64□□□□□ -1.51
LINC01088-208ENST00000511895 OASLQ15646 514 aaKnown RBP5.64□□□□□ -1.51
LINC01088-208ENST00000511895 SIGIRRQ6IA17 410 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 RGMBQ6NW40 437 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 SMRP1Q8NCR6 262 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 TDRD7Q8NHU6 1098 aaKnown RBP5.64□□□□□ -1.51
LINC01088-208ENST00000511895 TANKQ92844 425 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 BICD1Q96G01 975 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 MPP4Q96JB8 637 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 HARBI1Q96MB7 349 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 C7orf26Q96N11 449 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 ZNF385AQ96PM9 386 aaKnown RBP5.64□□□□□ -1.51
LINC01088-208ENST00000511895 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 GAREM1Q9H706 876 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 SMC4Q9NTJ3 1288 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 ZNF224Q9NZL3 707 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 DLGAP2Q9P1A6 1054 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 ORC3Q9UBD5 711 aaPredicted RBP5.64□□□□□ -1.51
LINC01088-208ENST00000511895 AASSQ9UDR5 926 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 TINAGQ9UJW2 476 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 KCNS2Q9ULS6 477 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 CRYBG1Q9Y4K1 1723 aa5.64□□□□□ -1.51
LINC01088-208ENST00000511895 MKI67P46013 3256 aaKnown RBP5.63□□□□□ -1.51
LINC01088-208ENST00000511895 FAM237AA0A1B0GTK4 181 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 MAGEA13PA6NCF6 341 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 B4E171 279 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 PRSS44E7EML9 344 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 VCYO14598 125 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 CLEC3BP05452 202 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 RRM1P23921 792 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 BDKRB2P30411 391 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 BSGP35613 385 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 PBX3P40426 434 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 TSPAN7P41732 249 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 F2RL1P55085 397 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 ZNF155Q12901 538 aaPredicted RBP5.63□□□□□ -1.51
LINC01088-208ENST00000511895 OLIG2Q13516 323 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 FAAH2Q6GMR7 532 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 PLEKHA7Q6IQ23 1121 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 FAM122CQ6P4D5 195 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 DLK2Q6UY11 383 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 PQLC2Q6ZP29 291 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 FOXRED2Q8IWF2 684 aa5.63□□□□□ -1.51
LINC01088-208ENST00000511895 TMEM19Q96HH6 336 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms