RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ITGA8P53708 1063 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 ATXN3P54252 364 aaPredicted RBP14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 MRPS25P82663 173 aaKnown RBP14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 CALCOCO2Q13137 446 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 NFATC2Q13469 925 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 PEX6Q13608 980 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 PTPRCAPQ14761 206 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 ATP13A5Q4VNC0 1218 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 CCDC38Q502W7 563 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 FAM151BQ6UXP7 276 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 MINDY1Q8N5J2 469 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 OR56A4Q8NGH8 313 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 GLYATL1Q969I3 302 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 SGSM3Q96HU1 749 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 TRIM31Q9BZY9 425 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 GAREM1Q9H706 876 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 TREX1Q9NSU2 369 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 SYBUQ9NX95 663 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 GRHL1Q9NZI5 618 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 SOX13Q9UN79 622 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 SLC17A4Q9Y2C5 497 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 DGKBQ9Y6T7 804 aa14.82□□□□□ -0.04
CDC42SE1-203ENST00000470278 A0A1B0GTQ1 180 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 MAGEB16A2A368 324 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 TMEM202A6NGA9 273 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 SDR42E2A6NKP2 422 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 GPR89AB7ZAQ6 455 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 AVILO75366 819 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 GPR89BP0CG08 455 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CSRP1P21291 193 aaKnown RBP14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CCT8P50990 548 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CRADDP78560 199 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 EIF2B5Q13144 721 aaKnown RBP14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CHRNA6Q15825 494 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 SNX20Q7Z614 316 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 PIP4P1Q86T03 277 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 DDHD1Q8NEL9 900 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 BTN2A2Q8WVV5 523 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 PDXPQ96GD0 296 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 SCARF2Q96GP6 870 aaPredicted RBP14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CDKN2AIPNLQ96HQ2 116 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 ZNF778Q96MU6 729 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 LRRC1Q9BTT6 524 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 GTPBP2Q9BX10 602 aaKnown RBP14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CARD6Q9BX69 1037 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 PHACTR1Q9C0D0 580 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 FGF22Q9HCT0 170 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 TMEM9BQ9NQ34 198 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CHRAC1Q9NRG0 131 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 KLQ9UEF7 1012 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 ANAPC5Q9UJX4 755 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 FNDC3AQ9Y2H6 1198 aaKnown RBP14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 SNX24Q9Y343 169 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 PCDHGB2Q9Y5G2 931 aa14.81□□□□□ -0.04
CDC42SE1-203ENST00000470278 CABIN1Q9Y6J0 2220 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 TRBV5-4A0A0C4DH59 114 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 FAM237BA0A1B0GVD1 139 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 H3BM21 787 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 INPP4BO15327 924 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 PCDHGA12O60330 932 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 CEACAM5P06731 702 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 ITGALP20701 1170 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 EPHA8P29322 1005 aaPredicted RBP14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 MC4RP32245 332 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 BLKP51451 505 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 ARSDP51689 593 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 CAV1Q03135 178 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 PPARDQ03181 441 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 SLC14A1Q13336 389 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 SHBQ15464 509 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 HIF1AQ16665 826 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 ALG11Q2TAA5 492 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 GPR33Q49SQ1 333 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 DNAJC21Q5F1R6 531 aaKnown RBP14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 LDLRAP1Q5SW96 308 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 AFTPHQ6ULP2 937 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 UNQ6494/PRO21346Q6UXR6 183 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 TMEM135Q86UB9 458 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 PDIK1LQ8N165 341 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 AGGF1Q8N302 714 aaeCLIP14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 MPP5Q8N3R9 675 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 DEFB124Q8NES8 71 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 ULK4Q96C45 1275 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 LRRC39Q96DD0 335 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 SIGLEC10Q96LC7 697 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 NAT9Q9BTE0 207 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 FAM129AQ9BZQ8 928 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 DPH5Q9H2P9 285 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 SAMD15Q9P1V8 674 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 TMPRSS11EQ9UL52 423 aa14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 PNMA8BQ9ULN7 279 aaPredicted RBP14.8□□□□□ -0.04
CDC42SE1-203ENST00000470278 PRSS38A1L453 326 aa14.79□□□□□ -0.04
CDC42SE1-203ENST00000470278 E7ESA3 106 aa14.79□□□□□ -0.04
CDC42SE1-203ENST00000470278 GPR39O43194 453 aa14.79□□□□□ -0.04
CDC42SE1-203ENST00000470278 VEGFDO43915 354 aa14.79□□□□□ -0.04
CDC42SE1-203ENST00000470278 SLC25A14O95258 325 aaPredicted RBP14.79□□□□□ -0.04
CDC42SE1-203ENST00000470278 RASGRP1O95267 797 aa14.79□□□□□ -0.04
CDC42SE1-203ENST00000470278 IVLP07476 585 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms