RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ZMYND8Q9ULU4 1186 aaPredicted RBP13.71□□□□□ -0.22
BRAT1-203ENST00000467558 TIMM22Q9Y584 194 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3DA0A087WVF3 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3IA0A087WXS9 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3EA0A087X179 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3KA0A087X1G2 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3FA6NER0 549 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3LB9A6J9 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 WFS1O76024 890 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ASLP04424 464 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3HP0C7X1 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 VAV1P15498 845 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CCR3P51677 355 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 RING1Q06587 406 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 EPS8Q12929 822 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TRIM32Q13049 653 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3GQ6DHY5 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3CQ6IPX1 549 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ZCCHC8Q6NZY4 707 aaKnown RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 R3HCC1LQ7Z5L2 792 aaKnown RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D3Q8IZP1 549 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 GPR156Q8NFN8 814 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 OR10T2Q8NGX3 314 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 OVCA2Q8WZ82 227 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 PANX1Q96RD7 426 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TMEM209Q96SK2 561 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 NPAS2Q99743 824 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 PCDH12Q9NPG4 1184 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 HPS4Q9NQG7 708 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 HS6ST1O60243 411 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 RASSF9O75901 435 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 UROSP10746 265 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TNK2Q07912 1038 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 GSTA3Q16772 222 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 KRT73Q86Y46 540 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF655Q8N720 491 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 WFIKKN2Q8TEU8 576 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 LENG8Q96PV6 779 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 PTPN18Q99952 460 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 PAAF1Q9BRP4 392 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 NDEL1Q9GZM8 345 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 NOL11Q9H8H0 719 aaKnown RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 RPS6KA6Q9UK32 745 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 SLC27A6Q9Y2P4 619 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 UBXN8O00124 270 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CRATP43155 626 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 SLC18A2Q05940 514 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CPSF7Q8N684 471 aaKnown RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 PROX1Q92786 737 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 TFB2MQ9H5Q4 396 aaKnown RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 REEP1Q9H902 201 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 SLC17A6Q9P2U8 582 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF490Q9ULM2 529 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CORO2BQ9UQ03 480 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 MYRFQ9Y2G1 1151 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 POLR3HQ9Y535 204 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 RFXANKO14593 260 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CNTN5O94779 1100 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ITPKAP23677 461 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 HSPA7P48741 367 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 FAM182AQ5T1J6 154 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CLEC6AQ6EIG7 209 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 GK5Q6ZS86 529 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 SNX20Q7Z614 316 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ZC3HC1Q86WB0 502 aaKnown RBP13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ZFP28Q8NHY6 868 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 NELL1Q92832 810 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ITCHQ96J02 903 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 HIC2Q96JB3 615 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 GPR62Q9BZJ7 368 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 SUV39H2Q9H5I1 410 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF358Q9NW07 568 aa13.7□□□□□ -0.22
BRAT1-203ENST00000467558 CLDN9O95484 217 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 EPOP01588 193 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 DDX6P26196 483 aaKnown RBP eCLIP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 TLX1P31314 330 aaPredicted RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 ECT2LQ008S8 904 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 SCAPQ12770 1279 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 LSM12Q3MHD2 195 aaKnown RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 CARD16Q5EG05 197 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 SULT1C3Q6IMI6 304 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 MRPL10Q7Z7H8 261 aaKnown RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 CAND1Q86VP6 1230 aaKnown RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 C17orf64Q86WR6 236 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 UTP15Q8TED0 518 aaKnown RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 CERS4Q9HA82 394 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 PRDX6P30041 224 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 GATMP50440 423 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 SPIDRQ14159 915 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 NRF1Q16656 503 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 717.8 ms