RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GRID2O43424 1007 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 CREG1O75629 220 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 DNAJB5O75953 348 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 UBXN7O94888 489 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 SERPINB6P35237 376 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 POLNQ7Z5Q5 900 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 AVL9Q8NBF6 648 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 LPCAT1Q8NF37 534 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 SSC4DQ8WTU2 575 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 CSPG4P5Q96PW8 444 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 PLEKHG4BQ96PX9 1271 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 FAM83DQ9H4H8 585 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 RMI1Q9H9A7 625 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 KLC4Q9NSK0 619 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 DNPEPQ9ULA0 475 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 PADI1Q9ULC6 663 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 LRRK2Q5S007 2527 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 NBASA2RRP1 2371 aa17.8■□□□□ 0.44
CHCHD3-203ENST00000448878 MN1Q10571 1320 aaPredicted RBP17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 C1orf232A0A0U1RR37 186 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 A1L4Q6 167 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 FZD6O60353 706 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 FTLP02792 175 aaPredicted RBP17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 ANKRD34CP0C6C1 535 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 IL1R2P27930 398 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 PMS2P54278 862 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 DSC2Q02487 901 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 IL11RAQ14626 422 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 SEPT7Q16181 437 aaKnown RBP17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 DPYSL2Q16555 572 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 PLA2G4EQ3MJ16 856 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 BOLA3Q53S33 107 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 TDRD12Q587J7 1177 aaKnown RBP17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 CAPRIN2Q6IMN6 1127 aaKnown RBP17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 IRF2BP2Q7Z5L9 587 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 ZNF653Q96CK0 615 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 PKD2L2Q9NZM6 624 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 MAP10Q9P2G4 905 aa17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 CNOT6Q9ULM6 557 aaKnown RBP17.79■□□□□ 0.44
CHCHD3-203ENST00000448878 A6NCN8 305 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 LILRA5A6NI73 299 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 FADS2P1A8MWK0 482 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 SPAG6O75602 509 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 C9P02748 559 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 PDGFAP04085 211 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 ATP1A3P13637 1013 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 CA4P22748 312 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 LEPRP48357 1165 aaKnown RBP17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 DNASE1L3Q13609 305 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 KRT81Q14533 505 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 INSCQ1MX18 579 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 ZNF648Q5T619 568 aaPredicted RBP17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 CACHD1Q5VU97 1274 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 CRTC3Q6UUV7 619 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 FAM92BQ6ZTR7 304 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 TMEM26Q6ZUK4 368 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 GALNT11Q8NCW6 608 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 CCHCR1Q8TD31 782 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 OR2AG1Q9H205 316 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 CARD9Q9H257 536 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 OGFRQ9NZT2 677 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 RCOR3Q9P2K3 495 aaPredicted RBP17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 ATXN10Q9UBB4 475 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 LIMA1Q9UHB6 759 aaKnown RBP17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 DNAJC16Q9Y2G8 782 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 SLC30A1Q9Y6M5 507 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 SCINQ9Y6U3 715 aa17.78■□□□□ 0.44
CHCHD3-203ENST00000448878 PDZK1P1A8MUH7 402 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 KIF1CO43896 1103 aaKnown RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 NUAK1O60285 661 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 MTA2O94776 668 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 SLC25A14O95258 325 aaPredicted RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 MT-ND3P03897 115 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 RARAP10276 462 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 TCF4P15884 667 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 ZNF8P17098 575 aaPredicted RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 PCK1P35558 622 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 GARSP41250 739 aaKnown RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 SPINT3P49223 89 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 ANKRD20A8PQ5CZ79 823 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 CCDC122Q5T0U0 273 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 IRGCQ6NXR0 463 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 PPP1R3BQ86XI6 285 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 TEX26Q8N6G2 289 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 CT55Q8WUE5 264 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 ERGIC2Q96RQ1 377 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 WDR24Q96S15 920 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 SPATA16Q9BXB7 569 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 TRIM55Q9BYV6 548 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 ZNF768Q9H5H4 540 aaKnown RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 PCDH9Q9HC56 1237 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 MRPL47Q9HD33 250 aaKnown RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 HAUS2Q9NVX0 235 aa17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 RBM22Q9NW64 420 aaKnown RBP eCLIP17.77■□□□□ 0.441e-7■■■■■ 41.1
CHCHD3-203ENST00000448878 SCHIP1Q9P0W5 487 aaPredicted RBP17.77■□□□□ 0.44
CHCHD3-203ENST00000448878 USP9YO00507 2555 aaPredicted RBP17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 XRCC1P18887 633 aaPredicted RBP17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 SLC19A1P41440 591 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 SSR1P43307 286 aaKnown RBP17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 ZNF165P49910 485 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms