RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DHFR2Q86XF0 187 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
SCAF4-202ENST00000399804 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
SCAF4-202ENST00000399804 SCN1AP35498 2009 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 A8MT66 165 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 TIMP1P01033 207 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 LCP2Q13094 533 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 MAD2L1Q13257 205 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 PHACTR4Q8IZ21 702 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 DNAJB14Q8TBM8 379 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 AP2M1Q96CW1 435 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 MOCOSQ96EN8 888 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 IL23AQ9NPF7 189 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 DLGAP2Q9P1A6 1054 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 NPHS1O60500 1241 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 DLDP09622 509 aaKnown RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 ATF6P18850 670 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 CCNHP51946 323 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 SPDYE7PQ495Y7 208 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 NET1Q7Z628 596 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 TBC1D19Q8N5T2 526 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 ZBTB2Q8N680 514 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 TWIST2Q8WVJ9 160 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 KCTD14Q9BQ13 255 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 RMND5AQ9H871 391 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 ARHGEF3Q9NR81 526 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 SH3BP4Q9P0V3 963 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 A0A1W2PQ67 120 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 TMEM233B4DJY2 109 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 K7ERQ8 282 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 ACADMP11310 421 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 TYRP14679 529 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 CCNFP41002 786 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 STC1P52823 247 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 RPL38P63173 70 aaKnown RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 RPS27LQ71UM5 84 aaKnown RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 HOMEZQ8IX15 550 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 SEPHS2Q99611 448 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 CCDC28BQ9BUN5 200 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 NOL11Q9H8H0 719 aaKnown RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 BRD9Q9H8M2 597 aa13.94□□□□□ -0.18
SCAF4-202ENST00000399804 MRM3Q9HC36 420 aaKnown RBP13.94□□□□□ -0.18
SCAF4-202ENST00000399804 C9JVG2 144 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 EPHX1P07099 455 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 FGF3P11487 239 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 PTDSS1P48651 473 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 PGFP49763 221 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 PLOD1Q02809 727 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ACSM2AQ08AH3 577 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 LRRC74AQ0VAA2 488 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ACSM2BQ68CK6 577 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ZNF784Q8NCA9 323 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 BHLHE22Q8NFJ8 381 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 OR6Y1Q8NGX8 325 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ASZ1Q8WWH4 475 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 OR52B2Q96RD2 323 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 MARCH4Q9P2E8 410 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 COL11A1P12107 1806 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 NUP205Q92621 2012 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 WDR47O94967 919 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 SOAT1P35610 550 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 CCR10P46092 362 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 NAA20P61599 178 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 WDR5P61964 334 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 PRKG2Q13237 762 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 TCEA2Q15560 299 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ATAT1Q5SQI0 421 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 CAPRIN2Q6IMN6 1127 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 FAM43BQ6ZT52 329 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 LINC01599Q8WXQ3 324 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 SLC39A13Q96H72 371 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 VPS50Q96JG6 964 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 AARSD1Q9BTE6 412 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ZDHHC2Q9UIJ5 367 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 IQCF5A8MTL0 148 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ZCCHC18P0CG32 403 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 CHRNA6Q15825 494 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 TRIM71Q2Q1W2 868 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 ZNF534Q76KX8 674 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 TCEAL8Q8IYN2 117 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 CYGBQ8WWM9 190 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 KLHL4Q9C0H6 718 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 IPPKQ9H8X2 491 aa13.93□□□□□ -0.18
SCAF4-202ENST00000399804 SPATS2LQ9NUQ6 558 aaKnown RBP13.93□□□□□ -0.18
SCAF4-202ENST00000399804 QSOX1O00391 747 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 TM7SF2O76062 418 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RHOP08100 348 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RPIAP49247 311 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 STK19P49842 368 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CHRNB3Q05901 458 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CYP51A1Q16850 503 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms