RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 AGO3Q9H9G7 860 aaKnown RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 ZNF232Q9UNY5 417 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ENTPD4Q9Y227 616 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ELOVL7A1L3X0 281 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 HAT1O14929 419 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 MATN3O15232 486 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 SERPINA1P01009 418 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ZNF37AP17032 561 aaPredicted RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 AOC1P19801 751 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 GPD2P43304 727 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 GLUD2P49448 558 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 PRKCQQ04759 706 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 DMPKQ09013 629 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 TUSC3Q13454 348 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 HNRNPDQ14103 355 aaKnown RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 REP15Q6BDI9 236 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 KIAA0930Q6ICG6 404 aaPredicted RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 DSG4Q86SJ6 1040 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 CACTIN-AS1Q8N1I8 211 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ELMO1Q92556 727 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 PPM1MQ96MI6 270 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 SLC38A2Q96QD8 506 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 AGAP2Q99490 1192 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ADI1Q9BV57 179 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 YIPF2Q9BWQ6 316 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 YTHDF1Q9BYJ9 559 aaKnown RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 SLITRK2Q9H156 845 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 OSGEPL1Q9H4B0 414 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 NXF3Q9H4D5 531 aaKnown RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 ALG2Q9H553 416 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 PDZD7Q9H5P4 517 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 RNF19AQ9NV58 838 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ADAMTS5Q9UNA0 930 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 SSR3Q9UNL2 185 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 MFHAS1Q9Y4C4 1052 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 OR6C75A6NL08 312 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 RGS10O43665 173 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 PIRTP0C851 137 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 UROSP10746 265 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 S100A1P23297 94 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 NTSP30990 170 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 MC4RP32245 332 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 CENPAP49450 140 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 RAB25P57735 213 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 SETMARQ53H47 684 aaPredicted RBP8.35□□□□□ -1.07
VPS36-201ENST00000378060 FAM92BQ6ZTR7 304 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 PACRGLQ8N7B6 248 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 ARL10Q8N8L6 244 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 FAM105AQ9NUU6 356 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 SLC9A8Q9Y2E8 581 aa8.35□□□□□ -1.07
VPS36-201ENST00000378060 EME2A4GXA9 379 aaPredicted RBP8.34□□□□□ -1.07
VPS36-201ENST00000378060 CLDN25C9JDP6 229 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 EDIL3O43854 480 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CLDN11O75508 207 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CAPN15O75808 1086 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 VNN1O95497 513 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CKBP12277 381 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CTGFP29279 349 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 MTHFRP42898 656 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 RFX3P48380 749 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CLCQ05315 142 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 PLCL1Q15111 1095 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 QPRTQ15274 297 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CNPY1Q3B7I2 92 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 VPS26BQ4G0F5 336 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 DUSP28Q4G0W2 176 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 GPR158Q5T848 1215 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 GALNT18Q6P9A2 607 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 C16orf59Q7L2K0 433 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 OTOP3Q7RTS5 596 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 SVOPLQ8N434 492 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 HJURPQ8NCD3 748 aaPredicted RBP8.34□□□□□ -1.07
VPS36-201ENST00000378060 SPPL2BQ8TCT7 592 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 RAB2BQ8WUD1 216 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 TOP1MTQ969P6 601 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 FZD8Q9H461 694 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 SPG21Q9NZD8 308 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 ZNF624Q9P2J8 865 aaPredicted RBP8.34□□□□□ -1.07
VPS36-201ENST00000378060 ZNHIT2Q9UHR6 403 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 POLR3HQ9Y535 204 aaPredicted RBP8.34□□□□□ -1.07
VPS36-201ENST00000378060 RBBP6Q7Z6E9 1792 aaKnown RBP8.34□□□□□ -1.07
VPS36-201ENST00000378060 MCM3APO60318 1980 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CCDC162PA2VCL2 907 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 FAM159BA6NKW6 160 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 SERPINB7O75635 380 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 SLC6A2P23975 617 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 DNAJB1P25685 340 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 CAPGP40121 348 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 KIR3DL1P43629 444 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 UGT2B15P54855 530 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 TAS2R39P59534 338 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 ELP6Q0PNE2 266 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 ACOX1Q15067 660 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 TSTD2Q5T7W7 516 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 EGFLAMQ63HQ2 1017 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 C11orf88Q6PI97 169 aa8.34□□□□□ -1.07
VPS36-201ENST00000378060 MACC1Q6ZN28 852 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms