RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SIT1Q9Y3P8 196 aa12□□□□□ -0.49
USF1-203ENST00000368021 A0A0U1RQS6 177 aa12□□□□□ -0.49
USF1-203ENST00000368021 C16orf96A6NNT2 1141 aa12□□□□□ -0.49
USF1-203ENST00000368021 ATP6V1G2O95670 118 aa12□□□□□ -0.49
USF1-203ENST00000368021 SLC35E2BP0CK96 405 aa12□□□□□ -0.49
USF1-203ENST00000368021 LHCGRP22888 699 aa12□□□□□ -0.49
USF1-203ENST00000368021 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
USF1-203ENST00000368021 PSMD7P51665 324 aa12□□□□□ -0.49
USF1-203ENST00000368021 SLC12A2P55011 1212 aa12□□□□□ -0.49
USF1-203ENST00000368021 PTSQ03393 145 aa12□□□□□ -0.49
USF1-203ENST00000368021 PON2Q15165 354 aa12□□□□□ -0.49
USF1-203ENST00000368021 PPM1JQ5JR12 505 aa12□□□□□ -0.49
USF1-203ENST00000368021 FAM45BPQ6NSW5 357 aa12□□□□□ -0.49
USF1-203ENST00000368021 RAPH1Q70E73 1250 aa12□□□□□ -0.49
USF1-203ENST00000368021 LDB1Q86U70 411 aaPredicted RBP12□□□□□ -0.49
USF1-203ENST00000368021 TSPAN33Q86UF1 283 aa12□□□□□ -0.49
USF1-203ENST00000368021 SLC41A1Q8IVJ1 513 aa12□□□□□ -0.49
USF1-203ENST00000368021 STK40Q8N2I9 435 aa12□□□□□ -0.49
USF1-203ENST00000368021 TMEM105Q8N8V8 129 aa12□□□□□ -0.49
USF1-203ENST00000368021 FAM45AQ8TCE6 357 aa12□□□□□ -0.49
USF1-203ENST00000368021 LPGAT1Q92604 370 aa12□□□□□ -0.49
USF1-203ENST00000368021 TBRG4Q969Z0 631 aaKnown RBP eCLIP12□□□□□ -0.49
USF1-203ENST00000368021 ELMO2Q96JJ3 720 aa12□□□□□ -0.49
USF1-203ENST00000368021 P2RY13Q9BPV8 354 aa12□□□□□ -0.49
USF1-203ENST00000368021 CCDC28BQ9BUN5 200 aa12□□□□□ -0.49
USF1-203ENST00000368021 VCXQ9H320 206 aa12□□□□□ -0.49
USF1-203ENST00000368021 FBRSL1Q9HCM7 1045 aaKnown RBP12□□□□□ -0.49
USF1-203ENST00000368021 B4GALT6Q9UBX8 382 aa12□□□□□ -0.49
USF1-203ENST00000368021 HCN2Q9UL51 889 aa12□□□□□ -0.49
USF1-203ENST00000368021 VWA7Q9Y334 891 aa12□□□□□ -0.49
USF1-203ENST00000368021 SLC30A1Q9Y6M5 507 aa12□□□□□ -0.49
USF1-203ENST00000368021 A0A087X1B8 175 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 GAPDHSO14556 408 aaPredicted RBP11.99□□□□□ -0.49
USF1-203ENST00000368021 NDUFS3O75489 264 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 SRP72O76094 671 aaKnown RBP11.99□□□□□ -0.49
USF1-203ENST00000368021 PRAMEF1O95521 474 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 HLA-EP13747 358 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 TIMP2P16035 220 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 BPIP17213 487 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 ITGB7P26010 798 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 AVPR2P30518 371 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 VIPR1P32241 457 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 PPARGP37231 505 aaPredicted RBP11.99□□□□□ -0.49
USF1-203ENST00000368021 SPAM1P38567 509 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 SLC26A3P40879 764 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 IL12RB1P42701 662 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 SERPINB4P48594 390 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 SUOXP51687 545 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 SEC24CP53992 1094 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 TAS2R39P59534 338 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 CCDC153Q494R4 210 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 GPR33Q49SQ1 333 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 RBM20Q5T481 1227 aaKnown RBP11.99□□□□□ -0.49
USF1-203ENST00000368021 HECTD2Q5U5R9 776 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 PSAPL1Q6NUJ1 521 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 SNX20Q7Z614 316 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 DSG4Q86SJ6 1040 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 CEP97Q8IW35 865 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 RAVER1Q8IY67 606 aaKnown RBP11.99□□□□□ -0.49
USF1-203ENST00000368021 PIANPQ8IYJ0 282 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 ANKS4BQ8N8V4 417 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 PJA1Q8NG27 643 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 C12orf65Q9H3J6 166 aaKnown RBP11.99□□□□□ -0.49
USF1-203ENST00000368021 LTB4R2Q9NPC1 389 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 IL26Q9NPH9 171 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 TMCO1Q9UM00 188 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 CRYL1Q9Y2S2 319 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 ACOT9Q9Y305 439 aa11.99□□□□□ -0.49
USF1-203ENST00000368021 TRBV5-4A0A0C4DH59 114 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 GLYATL1P3A0A0U1RQE8 302 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 AGAP14A8MT82 685 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 MAN2B1O00754 1011 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 BIRC5O15392 142 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 PLIN3O60664 434 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 TOP3BO95985 862 aaKnown RBP11.98□□□□□ -0.49
USF1-203ENST00000368021 GLULP15104 373 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 AOC1P19801 751 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 TAC1P20366 129 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 ITGALP20701 1170 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 CD9P21926 228 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 PTGER3P43115 390 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 GALK1P51570 392 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 NFATC2Q13469 925 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 ARHGEF7Q14155 803 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 ZRANB3Q5FWF4 1079 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 N4BP2L1Q5TBK1 243 aaPredicted RBP11.98□□□□□ -0.49
USF1-203ENST00000368021 EGFLAMQ63HQ2 1017 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 DPPA4Q7L190 304 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 TTC7BQ86TV6 843 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 RALGPS2Q86X27 583 aaPredicted RBP11.98□□□□□ -0.49
USF1-203ENST00000368021 CACNA2D3Q8IZS8 1091 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 PIP4K2CQ8TBX8 421 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 DTX3LQ8TDB6 740 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 KCNV2Q8TDN2 545 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 PPP1R16AQ96I34 528 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 TSNARE1Q96NA8 513 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 CCT8L2Q96SF2 557 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 FAM129BQ96TA1 746 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 NDNQ99608 321 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 TTC1Q99614 292 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms