RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PEX11AO75192 247 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 SPAG7O75391 227 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 SKAP2O75563 359 aaPredicted RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 SRP72O76094 671 aaKnown RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 MT-ND3P03897 115 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 LINGO3P0C6S8 592 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TPBGLP0DKB5 382 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 CYP2A6P11509 494 aaPredicted RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 OGNP20774 298 aaKnown RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TAS2R38P59533 333 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 RPS14P62263 151 aaKnown RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 KLC1Q07866 573 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 RBM20Q5T481 1227 aaKnown RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 LGSNQ5TDP6 509 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 CGB2Q6NT52 195 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 ZNF549Q6P9A3 640 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 CDHR3Q6ZTQ4 885 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 Q6ZVL8 140 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 ERN2Q76MJ5 926 aaKnown RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 CMC1Q7Z7K0 106 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 DSG4Q86SJ6 1040 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 CACUL1Q86Y37 369 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 OR2T3Q8NH03 318 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 GDAP1Q8TB36 358 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TSC22D3Q99576 134 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 HDAC8Q9BY41 377 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 C12orf65Q9H3J6 166 aaKnown RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 STOML1Q9UBI4 398 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 LNPEPQ9UIQ6 1025 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TMPRSS11EQ9UL52 423 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 MTF2Q9Y483 593 aaPredicted RBP14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TRBV5-4A0A0C4DH59 114 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SYNCRIPO60506 623 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 PRAMEF1O95521 474 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 TOP3BO95985 862 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CHRNB1P11230 501 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 HOXB2P14652 356 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 UGT1A6P19224 532 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 UGT1A1P22309 533 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 UGT1A4P22310 534 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 UGT1A3P35503 534 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 UGT1A5P35504 534 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CCNFP41002 786 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CD151P48509 253 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 NEK3P51956 506 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 TIAL1Q01085 375 aaKnown RBP eCLIP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 DNAJC3Q13217 504 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 FZD5Q13467 585 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CHRNA6Q15825 494 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 FASTKD1Q53R41 847 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 PPM1JQ5JR12 505 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 AGBL4Q5VU57 503 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 MRNIPQ6NTE8 343 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 IRGCQ6NXR0 463 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 FBXL19Q6PCT2 694 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 TECPR1Q7Z6L1 1165 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 RPLP0P6Q8NHW5 317 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 DENND1AQ8TEH3 1009 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 OMDQ99983 421 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 MYLK2Q9H1R3 596 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CA14Q9ULX7 337 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 NDRG2Q9UN36 371 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SORCS3Q9UPU3 1222 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CRYL1Q9Y2S2 319 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 C1QTNF3-AMACRE9PGA6 284 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 OR1I1O60431 355 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SPAM1P38567 509 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 ETV3P41162 512 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 ROR2Q01974 943 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SF3A3Q12874 501 aaKnown RBP eCLIP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 NFATC2Q13469 925 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 PDE1CQ14123 709 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 FBXO43Q4G163 708 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 ZRANB3Q5FWF4 1079 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 Q6ZS52 159 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CEP97Q8IW35 865 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 LPGAT1Q92604 370 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SCAMP4Q969E2 229 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 UTP4Q969X6 686 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 FAM131CQ96AQ9 280 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 ERP27Q96DN0 273 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 PPP1R16AQ96I34 528 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 NDNQ99608 321 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SSU72Q9NP77 194 aaKnown RBP14.59□□□□□ -0.07
CXCL12-201ENST00000343575 SNX15Q9NRS6 342 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 CD84Q9UIB8 345 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 MED16Q9Y2X0 877 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 FADS3Q9Y5Q0 445 aa14.59□□□□□ -0.07
CXCL12-201ENST00000343575 PLXNB3Q9ULL4 1909 aa14.58□□□□□ -0.07
CXCL12-201ENST00000343575 NUMA1Q14980 2115 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 GLYATL1P3A0A0U1RQE8 302 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 FAM95CA0A1B0GW59 222 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 ZWINTO95229 277 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 ASMTLO95671 621 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 XPAP23025 273 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-201ENST00000343575 PTPN4P29074 926 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 RPA3P35244 121 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-201ENST00000343575 PTPN5P54829 565 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 MXRA7P84157 204 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms