RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 UBXN10Q96LJ8 280 aa18.17■□□□□ 0.5
SHISA3-201ENST00000319234 TRMOQ9BU70 441 aa18.17■□□□□ 0.5
SHISA3-201ENST00000319234 SPATA16Q9BXB7 569 aa18.17■□□□□ 0.5
SHISA3-201ENST00000319234 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
SHISA3-201ENST00000319234 PRSS51A0A1B0GVH4 220 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 ACOT8O14734 319 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 CFLARO15519 480 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 MOSPD3O75425 235 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 PABPC4LP0CB38 370 aaKnown RBP18.16■□□□□ 0.5
SHISA3-201ENST00000319234 CCDC166P0CW27 439 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 FDXRP22570 491 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 CD70P32970 193 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 CSNK1DP48730 415 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 SH3BGRP55822 239 aaPredicted RBP18.16■□□□□ 0.5
SHISA3-201ENST00000319234 MRPS22P82650 360 aaKnown RBP18.16■□□□□ 0.5
SHISA3-201ENST00000319234 TEAD2Q15562 447 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 PLEKHG6Q3KR16 790 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 ARHGAP15Q53QZ3 475 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 ZNF549Q6P9A3 640 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 METTL3Q86U44 580 aaKnown RBP18.16■□□□□ 0.5
SHISA3-201ENST00000319234 TICAM1Q8IUC6 712 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 C7orf61Q8IZ16 206 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 TTC30BQ8N4P2 665 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 EFHBQ8N7U6 833 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 BHLHE22Q8NFJ8 381 aaPredicted RBP18.16■□□□□ 0.5
SHISA3-201ENST00000319234 NCSTNQ92542 709 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 C17orf80Q9BSJ5 609 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 TRIM4Q9C037 500 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 EPB41L1Q9H4G0 881 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 ABCB8Q9NUT2 735 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 EPS15L1Q9UBC2 864 aa18.16■□□□□ 0.5
SHISA3-201ENST00000319234 CAPN8A6NHC0 703 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 SOBPA7XYQ1 873 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 A8MT66 165 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 TMEM233B4DJY2 109 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 SMAD6O43541 496 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 DPP6P42658 865 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 ASB9Q96DX5 294 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 LMLNQ96KR4 655 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 TCF12Q99081 682 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 UNKQ9C0B0 810 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 SUCOQ9UBS9 1254 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 SARDHQ9UL12 918 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 CCL26Q9Y258 94 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 PCDHB9Q9Y5E1 797 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 CXorf51AA0A1B0GTR3 108 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 SMIM31A0A1B0GVY4 71 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 C5orf67F2Z3F1 127 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 TXNDC9O14530 226 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 STX7O15400 261 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 RHOP08100 348 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 HOXA9P31269 272 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 MAPK8P45983 427 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 PKNOX1P55347 436 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 MS4A2Q01362 244 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 PTK2BQ14289 1009 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 ARMC12Q5T9G4 340 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 FBXL19Q6PCT2 694 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 TMEM207Q6UWW9 146 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 ANKRD49Q8WVL7 239 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 AARSD1Q9BTE6 412 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 TM6SF2Q9BZW4 377 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 POPDC3Q9HBV1 291 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 POLR3BQ9NW08 1133 aaPredicted RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 PACSIN3Q9UKS6 424 aa18.15■□□□□ 0.5
SHISA3-201ENST00000319234 CNOT11Q9UKZ1 510 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 INTS6Q9UL03 887 aaKnown RBP18.15■□□□□ 0.5
SHISA3-201ENST00000319234 C15orf38-AP3S2A0A0A6YYH1 394 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 PGLSO95336 258 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 SLC4A1P02730 911 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 PRSS56P0CW18 603 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 IRS1P35568 1242 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 SUOXP51687 545 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 POLE2P56282 527 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 CNPY1Q3B7I2 92 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 ARPINQ7Z6K5 226 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 CUZD1Q86UP6 607 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 LEMD2Q8NC56 503 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 SGF29Q96ES7 293 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 MYO19Q96H55 970 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 MARK4Q96L34 752 aa18.14■□□□□ 0.49
SHISA3-201ENST00000319234 MTIF3Q9H2K0 278 aaKnown RBP18.14■□□□□ 0.49
SHISA3-201ENST00000319234 MTCL1Q9Y4B5 1905 aaKnown RBP18.14■□□□□ 0.49
SHISA3-201ENST00000319234 UBDO15205 165 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 CLASP2O75122 1294 aaKnown RBP18.13■□□□□ 0.49
SHISA3-201ENST00000319234 HNRNPA1P09651 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHISA3-201ENST00000319234 HNRNPLP14866 589 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHISA3-201ENST00000319234 ATP4BP51164 291 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 PSME3P61289 254 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 TIAL1Q01085 375 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHISA3-201ENST00000319234 CAMK1Q14012 370 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 RIN3Q8TB24 985 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 PIH1D2Q8WWB5 315 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 NPAS2Q99743 824 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 MAGEE1Q9HCI5 957 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 TDP1Q9NUW8 608 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 EVLQ9UI08 416 aaPredicted RBP18.13■□□□□ 0.49
SHISA3-201ENST00000319234 FKBPLQ9UIM3 349 aa18.13■□□□□ 0.49
SHISA3-201ENST00000319234 ALPK3Q96L96 1907 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms