RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 YAP1P46937 504 aaKnown RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 ZNF132P52740 706 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 TAF1CQ15572 869 aaPredicted RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 CPSF6Q16630 551 aaKnown RBP eCLIP19.2■□□□□ 0.667e-8■■■□□ 15.3
USP48-201ENST00000308271 SMYD5Q6GMV2 418 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 ERICH5Q6P6B1 374 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 AHSA2Q719I0 299 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 KBTBD6Q86V97 674 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 ASB8Q9H765 288 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 SCN11AQ9UI33 1791 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 NPEPPSL1A6NEC2 478 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 A8MT66 165 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 BMP10O95393 424 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 ADORA2AP29274 412 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 GALNT3Q14435 633 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 LDB1Q86U70 411 aaPredicted RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 PHF10Q8WUB8 498 aaKnown RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 ZUFSPQ96AP4 578 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 PEBP4Q96S96 227 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 SLC39A3Q9BRY0 314 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 CNOT11Q9UKZ1 510 aaKnown RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 H3BNH8 94 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 TFECO14948 347 aaPredicted RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 MBL2P11226 248 aaPredicted RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 NCCRP1Q6ZVX7 275 aaPredicted RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 SIAH1Q8IUQ4 282 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 C17orf50Q8WW18 174 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 COL1A2P08123 1366 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 RPS7P62081 194 aaKnown RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 FCHO2Q0JRZ9 810 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 IQSEC1Q6DN90 963 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 CNSTQ6PJW8 725 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 WDR36Q8NI36 951 aaKnown RBP19.2■□□□□ 0.66
USP48-201ENST00000308271 AP3S1Q92572 193 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 MED8Q96G25 268 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 ZNHIT2Q9UHR6 403 aa19.2■□□□□ 0.66
USP48-201ENST00000308271 C4AP0C0L4 1744 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 C4BP0C0L5 1744 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 FAM234BA2RU67 622 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 HAT1O14929 419 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 RNASEH2AO75792 299 aaKnown RBP19.19■□□□□ 0.66
USP48-201ENST00000308271 IL6P05231 212 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 HERVK_113P63132 956 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 CSNK2BP67870 215 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 FAM182AQ5T1J6 154 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 HDDC2Q7Z4H3 204 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 NTAN1Q96AB6 310 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 TMEM159Q96B96 161 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 MAGEB10Q96LZ2 347 aaPredicted RBP19.19■□□□□ 0.66
USP48-201ENST00000308271 FCRL5Q96RD9 977 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 ERVK-6Q9BXR3 956 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 DPEP3Q9H4B8 488 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 ING3Q9NXR8 418 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 MOCS1Q9NZB8 636 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 TRPC4Q9UBN4 977 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 FBXW11Q9UKB1 542 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 UGT2B4P06133 528 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 C8BP07358 591 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 CCT3P49368 545 aaKnown RBP19.19■□□□□ 0.66
USP48-201ENST00000308271 SKIV2LQ15477 1246 aaKnown RBP19.19■□□□□ 0.66
USP48-201ENST00000308271 PYDC2Q56P42 97 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 ZNF773Q6PK81 442 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 CHSY3Q70JA7 882 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 OR5K1Q8NHB7 308 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 CLEC4CQ8WTT0 213 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 STYXQ8WUJ0 223 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 FCGR1BQ92637 280 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 AKTIPQ9H8T0 292 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 LRTM1Q9HBL6 345 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 GRIN3BO60391 1043 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 PSEN2P49810 448 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 SCNN1GP51170 649 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 BCAP31P51572 246 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 PLET1Q6UQ28 207 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 C15orf39Q6ZRI6 1047 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 SLC16A10Q8TF71 515 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 PRICKLE1Q96MT3 831 aaPredicted RBP19.19■□□□□ 0.66
USP48-201ENST00000308271 GMIPQ9P107 970 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 TMED5Q9Y3A6 229 aa19.19■□□□□ 0.66
USP48-201ENST00000308271 RAB25P57735 213 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 BCL2L1Q07817 233 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 CEACAM7Q14002 265 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 SOWAHAQ2M3V2 549 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 SPATS1Q496A3 300 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 ZNF544Q6NX49 715 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 CDC73Q6P1J9 531 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 SMG8Q8ND04 991 aaKnown RBP19.18■□□□□ 0.66
USP48-201ENST00000308271 IRGQQ8WZA9 623 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 FEM1AQ9BSK4 669 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 MYOCOSA0A1B0GUC4 107 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 ALDH4A1P30038 563 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 RPL9P32969 192 aaKnown RBP19.18■□□□□ 0.66
USP48-201ENST00000308271 GSK3BP49841 420 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 OR10A6Q8NH74 314 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 CRYGNQ8WXF5 182 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 KLHL32Q96NJ5 620 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 DIABLOQ9NR28 239 aa19.18■□□□□ 0.66
USP48-201ENST00000308271 KLHL28Q9NXS3 571 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms