RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 LYZL4Q96KX0 146 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 CEP295NLQ96MC4 621 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 TMEM204Q9BSN7 226 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 TEX12Q9BXU0 123 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 SEZ6LQ9BYH1 1024 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 SIL1Q9H173 461 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 GAREM1Q9H706 876 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 ANKEF1Q9NU02 776 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 PADI1Q9ULC6 663 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 RABGAP1Q9Y3P9 1069 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 TMEM8BA6NDV4 472 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 MID1O15344 667 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 KCNN4O15554 427 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 KCNAB3O43448 404 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 ERAL1O75616 437 aaKnown RBP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 BEST1O76090 585 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 CSPG5O95196 566 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 PRSS2P07478 247 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 ADRB2P07550 413 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 NGFRP08138 427 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 ACAA1P09110 424 aaPredicted RBP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 LINC00271P0C7V0 271 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 IL11P20809 199 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 S1PR1P21453 382 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 MYBPHQ13203 477 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 MAD2L1Q13257 205 aaPredicted RBP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 BECN1Q14457 450 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 FAM133BQ5BKY9 247 aaKnown RBP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 LRCH2Q5VUJ6 765 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 KRT79Q5XKE5 535 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 ANKRD23Q86SG2 305 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 RBM23Q86U06 439 aaKnown RBP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 SAMD14Q8IZD0 417 aaPredicted RBP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 TAGAPQ8N103 731 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 SCML4Q8N228 414 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 THAP6Q8TBB0 222 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 ZNF622Q969S3 477 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC54-201ENST00000261058 SLC22A18Q96BI1 424 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 ORAI1Q96D31 301 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 GAD1Q99259 594 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 MXD3Q9BW11 206 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 TMEM39BQ9GZU3 492 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 PDE7BQ9NP56 450 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 SMARCAL1Q9NZC9 954 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 STK39Q9UEW8 545 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 TTLL3Q9Y4R7 772 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 NFS1Q9Y697 457 aa4.39□□□□□ -1.71
CCDC54-201ENST00000261058 A0A1W2PP11 408 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 LNP1A1A4G5 178 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 B4DLN1 442 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TMCC2O75069 709 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CLDN14O95500 239 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 HSP90AB1P08238 724 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 EIF2DP41214 584 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SUOXP51687 545 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 MRPL12P52815 198 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SNX16P57768 344 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TAS2R38P59533 333 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TUBA1BP68363 451 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 IFI35P80217 286 aaPredicted RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 MVPQ14764 893 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CDC37Q16543 378 aaPredicted RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CALCRLQ16602 461 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 RAB6CQ53S08 254 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 C18orf63Q68DL7 685 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 RHBDF2Q6PJF5 856 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 PRPF39Q86UA1 669 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SPATA2LQ8IUW3 424 aaPredicted RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SCYL3Q8IZE3 742 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 LSMEM1Q8N8F7 131 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 OR5R1Q8NH85 324 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 HM13Q8TCT9 377 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TMED6Q8WW62 240 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TANKQ92844 425 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 NEUROG1Q92886 237 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SAT2Q96F10 170 aaPredicted RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CSF3RQ99062 836 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 GFI1Q99684 422 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 RAB6CQ9H0N0 254 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 HRH4Q9H3N8 390 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CD93Q9NPY3 652 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 GIMAP4Q9NUV9 329 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TMEM30AQ9NV96 361 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 ZNF224Q9NZL3 707 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SELENONQ9NZV5 590 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 DNAJB4Q9UDY4 337 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 GLOD5A6NK44 160 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CTDSP2O14595 271 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 ANKRD28O15084 1053 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 GPC4O75487 556 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 KDM4BO94953 1096 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 PPP1R3DO95685 299 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 MMP9P14780 707 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 AKR1B1P15121 316 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 TRIM21P19474 475 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CDKN2AP42771 156 aaKnown RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 MSH2P43246 934 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 NRIP1P48552 1158 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 RGS19P49795 217 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms