RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZSCAN5AQ9BUG6 496 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 OSBPL8Q9BZF1 889 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 GPR63Q9BZJ6 419 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 TRABDQ9H4I3 376 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ASCL3Q9NQ33 180 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 THSD1Q9NS62 852 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ZNHIT2Q9UHR6 403 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 SATB2Q9UPW6 733 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 SHOC2Q9UQ13 582 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF711Q9Y462 761 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ACACAQ13085 2346 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 RHPN2P1A8MT19 583 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 GPR89AB7ZAQ6 455 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 D6RAR5 112 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 PMPCBO75439 489 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 ASMTLO95671 621 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 ATP1A1P05023 1023 aaKnown RBP10.43□□□□□ -0.74
CCDC9-203ENST00000596938 PIRTP0C851 137 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 GPR89BP0CG08 455 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 NFKB1P19838 968 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 HMGCLP35914 325 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 ACTR1BP42025 376 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 INHBCP55103 352 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 WNT3AP56704 352 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 ACTR1AP61163 376 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 SQSTM1Q13501 440 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 NOMO1Q15155 1222 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 SLC30A9Q6PML9 568 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 MARK2Q7KZI7 788 aaKnown RBP10.43□□□□□ -0.74
CCDC9-203ENST00000596938 TRIM74Q86UV6 250 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 NAGSQ8N159 534 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 TXLNBQ8N3L3 684 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 Q8N9G6 341 aaPredicted RBP10.43□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF248Q8NDW4 579 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 ACRBPQ8NEB7 543 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 DTX3LQ8TDB6 740 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 TMEM159Q96B96 161 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 FERMT1Q9BQL6 677 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 SPATA16Q9BXB7 569 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 STRADBQ9C0K7 418 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 CARD9Q9H257 536 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 SUDS3Q9H7L9 328 aaPredicted RBP10.43□□□□□ -0.74
CCDC9-203ENST00000596938 TRIM39Q9HCM9 518 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 UBP1Q9NZI7 540 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 KLHL8Q9P2G9 620 aaPredicted RBP10.43□□□□□ -0.74
CCDC9-203ENST00000596938 PLEKHM1Q9Y4G2 1056 aa10.43□□□□□ -0.74
CCDC9-203ENST00000596938 OAS3Q9Y6K5 1087 aaKnown RBP10.43□□□□□ -0.74
CCDC9-203ENST00000596938 URB1O60287 2271 aaKnown RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 LOC400499M0QZD8 3231 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 TDRD6O60522 2096 aaKnown RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 GRID2IPA4D2P6 1211 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 CDRT15L2A8MXV6 281 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 H7C0C1 242 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 PLD2O14939 933 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 AURKAO14965 403 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 PPM1DO15297 605 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 NUAK1O60285 661 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF189O75820 626 aaPredicted RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 TJP3O95049 919 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 SLC25A14O95258 325 aaPredicted RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ITGA2BP08514 1039 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 BPIP17213 487 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ITPKBP27987 946 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 RBL1P28749 1068 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 TNNT3P45378 269 aaPredicted RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ABCG1P45844 678 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ATP5OP48047 213 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 CLCNKAP51800 687 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 MAZP56270 477 aaKnown RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 PCBP4P57723 403 aaKnown RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 KIF5AQ12840 1032 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 MPP3Q13368 585 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 C3orf38Q5JPI3 329 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 SIRPB2Q5JXA9 342 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 CCDC181Q5TID7 509 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ZDHHC20Q5W0Z9 365 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 RAB11FIP2Q7L804 512 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 B3GNT8Q7Z7M8 397 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 CLEC14AQ86T13 490 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 KIAA1328Q86T90 577 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 PDZD3Q86UT5 571 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 PIM3Q86V86 326 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 SYCE1Q8N0S2 351 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 TRAM1L1Q8N609 369 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 UBE2Q2Q8WVN8 375 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ALG3Q92685 438 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 GLYATL1Q969I3 302 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 HAUS1Q96CS2 278 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 OXNAD1Q96HP4 312 aaPredicted RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 MRGPRX2Q96LB1 330 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 PLEKHG4BQ96PX9 1271 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 HERPUD2Q9BSE4 406 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 DPH1Q9BZG8 443 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 SYNDIG1Q9H7V2 258 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 HACD3Q9P035 362 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ATXN10Q9UBB4 475 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 RALYQ9UKM9 306 aaKnown RBP10.42□□□□□ -0.74
CCDC9-203ENST00000596938 SPO11Q9Y5K1 396 aa10.42□□□□□ -0.74
CCDC9-203ENST00000596938 ADGRG1Q9Y653 693 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms