RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 MPOP05164 745 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 FGF1P05230 155 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 RPLP0P05388 317 aaKnown RBP16.5■□□□□ 0.23
SREBF1-219ENST00000580540 MAZP56270 477 aaKnown RBP16.5■□□□□ 0.23
SREBF1-219ENST00000580540 MPP3Q13368 585 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 RTP5Q14D33 572 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 PYCR3Q53H96 274 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 ZNF569Q5MCW4 686 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 ZNF648Q5T619 568 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-219ENST00000580540 FOXR1Q6PIV2 292 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 WDR48Q8TAF3 677 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 BLOC1S5Q8TDH9 187 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 ATXN7L3BQ96GX2 97 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 GFM1Q96RP9 751 aaKnown RBP16.5■□□□□ 0.23
SREBF1-219ENST00000580540 FICDQ9BVA6 458 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 LRIT1Q9P2V4 623 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 DKK4Q9UBT3 224 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 RNF215Q9Y6U7 377 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 ARHGEF17Q96PE2 2063 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-219ENST00000580540 APC2O95996 2303 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 TRBV23OR9-2A0A075B6M9 112 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 DDX3YO15523 660 aaKnown RBP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 TCEA3O75764 348 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 SLC25A14O95258 325 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 ECEL1O95672 775 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 GLB1P16278 677 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 BPIP17213 487 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 GEMP55040 296 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 GABREP78334 506 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 HLTFQ14527 1009 aaKnown RBP eCLIP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 PRPSAP1Q14558 356 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 C3orf38Q5JPI3 329 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 ANKRD20A2Q5SQ80 823 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 CERCAMQ5T4B2 595 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 ANKRD20A1Q5TYW2 823 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 ANKRD20A3Q5VUR7 823 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 C19orf48Q6RUI8 117 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 CHST15Q7LFX5 561 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 CCNJLQ8IV13 435 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 RNF10Q8N5U6 811 aaKnown RBP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 CCDC110Q8TBZ0 833 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 PATE1Q8WXA2 126 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 SCARF2Q96GP6 870 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 ZSCAN5AQ9BUG6 496 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 TSGA10Q9BZW7 698 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 GBA3Q9H227 469 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 LRRN3Q9H3W5 708 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 ST14Q9Y5Y6 855 aa16.49■□□□□ 0.23
SREBF1-219ENST00000580540 URB1O60287 2271 aaKnown RBP16.49■□□□□ 0.23
SREBF1-219ENST00000580540 RHPN2P1A8MT19 583 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 ARHGAP6O43182 974 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 BUD23O43709 281 aaKnown RBP16.48■□□□□ 0.23
SREBF1-219ENST00000580540 KRT86O43790 486 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 ANXA9O76027 345 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 AGTP01019 485 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 EPOP01588 193 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 HLA-DPA1P20036 260 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 PSMB4P28070 264 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 PEX6Q13608 980 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 SLC1A5Q15758 541 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 ARL14Q8N4G2 192 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 TRAM1L1Q8N609 369 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 HNRNPLLQ8WVV9 542 aaKnown RBP16.48■□□□□ 0.23
SREBF1-219ENST00000580540 APOL2Q9BQE5 337 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 OR2AG1Q9H205 316 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 VPS18Q9P253 973 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 ATXN10Q9UBB4 475 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 ATXN7L1Q9ULK2 861 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-219ENST00000580540 PCYT1BQ9Y5K3 369 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-219ENST00000580540 ENTPD2Q9Y5L3 495 aa16.48■□□□□ 0.23
SREBF1-219ENST00000580540 A0A1W2PQM1 296 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 AGRPO00253 132 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 NTN3O00634 580 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-219ENST00000580540 DNAJC6O75061 913 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 ACP5P13686 325 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 ALDH4A1P30038 563 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 ACTN2P35609 894 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 PPM1FP49593 454 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-219ENST00000580540 DCDC1P59894 354 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 AMZ1Q400G9 498 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 GLT6D1Q7Z4J2 308 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 TTC13Q8NBP0 860 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 CCDC112Q8NEF3 446 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 GDAP1Q8TB36 358 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 GLYATL1Q969I3 302 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 HES6Q96HZ4 224 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 SPATA13Q96N96 652 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 FOXP3Q9BZS1 431 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 TRABDQ9H4I3 376 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 POLR1BQ9H9Y6 1135 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 EPB41L5Q9HCM4 733 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 HACD3Q9P035 362 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 APPL1Q9UKG1 709 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 SATB2Q9UPW6 733 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 KCNK6Q9Y257 313 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 DMXL2Q8TDJ6 3036 aa16.47■□□□□ 0.23
SREBF1-219ENST00000580540 FREM2Q5SZK8 3169 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 WDFY3Q8IZQ1 3526 aa16.46■□□□□ 0.23
SREBF1-219ENST00000580540 TCRBV7S2A1N4TA0A589 114 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms