RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 COL28A1Q2UY09 1125 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 FAM173BQ6P4H8 233 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 KRBA2Q6ZNG9 492 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 Q6ZSN1 163 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 TRAPPC11Q7Z392 1133 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 WDR49Q8IV35 697 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 NUP93Q8N1F7 819 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 ZNF808Q8N4W9 903 aaPredicted RBP5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 ANKRD53Q8N9V6 530 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 B3GALNT2Q8NCR0 500 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 SCAMP5Q8TAC9 235 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 UBE2Q2Q8WVN8 375 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 IPCEF1Q8WWN9 437 aaPredicted RBP5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 FBXO32Q969P5 355 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 CCDC127Q96BQ5 260 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 SLC7A6OSQ96CW6 309 aaPredicted RBP5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 CEP295NLQ96MC4 621 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 SLITRK1Q96PX8 696 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 KCNK16Q96T55 309 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 PACSIN1Q9BY11 444 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 MAGEB5Q9BZ81 275 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 TRIM9Q9C026 710 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 ELOVL4Q9GZR5 314 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 CHST8Q9H2A9 424 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 SLC6A15Q9H2J7 730 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 NELFAQ9H3P2 528 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 OLFML3Q9NRN5 406 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 IFT80Q9P2H3 777 aaPredicted RBP5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 TBC1D14Q9P2M4 693 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 DEC1Q9P2X7 70 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 SH3BP1Q9Y3L3 701 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 RAD54BQ9Y620 910 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 KNL1Q8NG31 2342 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 CELSR3Q9NYQ7 3312 aa5.64□□□□□ -1.51
HNRNPC-233ENST00000557768 DOCK9Q9BZ29 2069 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CABIN1Q9Y6J0 2220 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 APC2O95996 2303 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 MUC22E2RYF6 1773 aaPredicted RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 FRMD3A2A2Y4 597 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CLCA1A8K7I4 914 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 A8MXQ7 604 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TMEM233B4DJY2 109 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 WASH3PC4AMC7 463 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 NEDD8-MDP1E9PL57 170 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 H0Y626 953 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 MYO1CO00159 1063 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 PIP5K1BO14986 540 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 KIAA0391O15091 583 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SNX2O60749 519 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TACC1O75410 805 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 RASSF9O75901 435 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 RTN3O95197 1032 aaPredicted RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TRIM16O95361 564 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TNNI1P19237 187 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CNTFP26441 200 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 RDXP35241 583 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 PGFP49763 221 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CYP2J2P51589 502 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CDH8P55286 799 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 MYL6P60660 151 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SP140Q13342 867 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 ALCAMQ13740 583 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 RABEP1Q15276 862 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SNRNP35Q16560 246 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 NRN1LQ496H8 165 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SOWAHCQ53LP3 525 aaPredicted RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 HECTD3Q5T447 861 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 RETSATQ6NUM9 610 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 KIAA1324Q6UXG2 1013 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CCDC73Q6ZRK6 1079 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 PAQR9Q6ZVX9 377 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 ZNF572Q7Z3I7 529 aaPredicted RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TRMT11Q7Z4G4 463 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 PLXDC1Q8IUK5 500 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 NAXDQ8IW45 347 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CCDC65Q8IXS2 484 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 D2HGDHQ8N465 521 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SLC15A4Q8N697 577 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 PDILTQ8N807 584 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TERB1Q8NA31 727 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 FAM71BQ8TC56 605 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 STYXQ8WUJ0 223 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 OTUB2Q96DC9 234 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 GPHA2Q96T91 129 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 MED10Q9BTT4 135 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 CNPPD1Q9BV87 410 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 BBS2Q9BXC9 721 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 NACA2Q9H009 215 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SMYD3Q9H7B4 428 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SPHK2Q9NRA0 654 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 DNAJC17Q9NVM6 304 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 TESMINQ9Y4I5 508 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 PAXBP1Q9Y5B6 917 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 SRPRBQ9Y5M8 271 aaKnown RBP5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 RPS6KL1Q9Y6S9 549 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 LOC400499M0QZD8 3231 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 BPTFQ12830 3046 aa5.63□□□□□ -1.51
HNRNPC-233ENST00000557768 URB1O60287 2271 aaKnown RBP5.62□□□□□ -1.51
HNRNPC-233ENST00000557768 PRSS29PA6NIE9 313 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms