RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 SPATA16Q9BXB7 569 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 STRADBQ9C0K7 418 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 LRRN3Q9H3W5 708 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.06□□□□□ -0.321e-9■■■□□ 15.2
HNRNPC-205ENST00000553300 HACD3Q9P035 362 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 AMFRQ9UKV5 643 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 CNOT6Q9ULM6 557 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 SHOC2Q9UQ13 582 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 TMEM98Q9Y2Y6 226 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 ZNF711Q9Y462 761 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
HNRNPC-205ENST00000553300 ITPR1Q14643 2758 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 CCDC187A0A096LP49 1063 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 GRID2IPA4D2P6 1211 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 RHPN2P1A8MT19 583 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 D6RAR5 112 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 INPP4BO15327 924 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ANXA9O76027 345 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 STK10O94804 968 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 MPOP05164 745 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 HLA-DPA1P20036 260 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 AK4P27144 223 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 HMGCLP35914 325 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ACTR1BP42025 376 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 GPR3P46089 330 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 WNT3AP56704 352 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 GSDMDP57764 484 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ACTR1AP61163 376 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 CCL7P80098 99 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 BIRC2Q13490 618 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 SLC30A9Q6PML9 568 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 KDELC1Q6UW63 502 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 SPRED1Q7Z699 444 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ARL14Q8N4G2 192 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 TRAM1L1Q8N609 369 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ACTL9Q8TC94 416 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 EID2BQ96D98 161 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ATXN7L3BQ96GX2 97 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 LIN37Q96GY3 246 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 PPP1R2P1Q96PQ5 205 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 PLEKHG4BQ96PX9 1271 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 CARD9Q9H257 536 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 SUDS3Q9H7L9 328 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 TRIM39Q9HCM9 518 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 THSD1Q9NS62 852 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 UBP1Q9NZI7 540 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ZNHIT2Q9UHR6 403 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 RABGEF1Q9UJ41 708 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 LHX6Q9UPM6 363 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
HNRNPC-205ENST00000553300 ADAMTS20P59510 1910 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 GOLGA6L9A6NEM1 432 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 FADS2P1A8MWK0 482 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 TLX3O43711 291 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 NUAK1O60285 661 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 DNAJC6O75061 913 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 SLC25A14O95258 325 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 ECEL1O95672 775 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 PIRTP0C851 137 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 CCKBRP32239 447 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 GEMP55040 296 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 INHBCP55103 352 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 PCBP4P57723 403 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 OTUD4Q01804 1114 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 NR1D2Q14995 579 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 MARK2Q7KZI7 788 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 ZNF438Q7Z4V0 828 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 TRIM74Q86UV6 250 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 SPC24Q8NBT2 197 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 GPR26Q8NDV2 337 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 ZNF248Q8NDW4 579 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 HNRNPLLQ8WVV9 542 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 TMEM159Q96B96 161 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 MRGPRX2Q96LB1 330 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 SLC46A1Q96NT5 459 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 RSPH14Q9UHP6 348 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-205ENST00000553300 ZFC3H1O60293 1989 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 CPNE6O95741 557 aa13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 ATP1A1P05023 1023 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 RBP3P10745 1247 aa13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 PYGMP11217 842 aa13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 SLC2A4P14672 509 aa13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 BPIP17213 487 aa13.03□□□□□ -0.32
HNRNPC-205ENST00000553300 RBL1P28749 1068 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms