RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 PTPMT1Q8WUK0 201 aaPredicted RBP6.33□□□□□ -1.4
LEMD3-206ENST00000545026 NSMCE1Q8WV22 266 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 OIT3Q8WWZ8 545 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 ZNF622Q969S3 477 aaKnown RBP eCLIP6.33□□□□□ -1.4
LEMD3-206ENST00000545026 RHBDF1Q96CC6 855 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 NUDCD1Q96RS6 583 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 BAG1Q99933 345 aaPredicted RBP6.33□□□□□ -1.4
LEMD3-206ENST00000545026 MMTAG2Q9BU76 263 aaKnown RBP6.33□□□□□ -1.4
LEMD3-206ENST00000545026 AP1M1Q9BXS5 423 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 FAM234AQ9H0X4 552 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 RBM38Q9H0Z9 239 aaKnown RBP6.33□□□□□ -1.4
LEMD3-206ENST00000545026 C17orf75Q9HAS0 396 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 DNAJB4Q9UDY4 337 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 AGO1Q9UL18 857 aaKnown RBP6.33□□□□□ -1.4
LEMD3-206ENST00000545026 FZD10Q9ULW2 581 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 SQORQ9Y6N5 450 aa6.33□□□□□ -1.4
LEMD3-206ENST00000545026 hCG_1809904A0A1W2PP81 198 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 A0A1W2PPE2 198 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 A0A1W2PR64 198 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 PLRG1O43660 514 aaKnown RBP6.32□□□□□ -1.4
LEMD3-206ENST00000545026 DDNO94850 711 aaPredicted RBP6.32□□□□□ -1.4
LEMD3-206ENST00000545026 CH25HO95992 272 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 HOXD3P31249 432 aaPredicted RBP6.32□□□□□ -1.4
LEMD3-206ENST00000545026 PLCD1P51178 756 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 HNRNPH2P55795 449 aaKnown RBP6.32□□□□□ -1.4
LEMD3-206ENST00000545026 UBXN2AP68543 259 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 Q0VFX4 171 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 PRPF4BQ13523 1007 aaKnown RBP6.32□□□□□ -1.4
LEMD3-206ENST00000545026 KYNUQ16719 465 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 CCDC142Q17RM4 750 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 FAM69BQ5VUD6 431 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 NSUN5P2Q63ZY6 315 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 FRG2Q64ET8 278 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 LCN10Q6JVE6 187 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 DUS1LQ6P1R4 473 aaKnown RBP6.32□□□□□ -1.4
LEMD3-206ENST00000545026 SLC36A4Q6YBV0 504 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 NRROSQ86YC3 692 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 POMGNT2Q8NAT1 580 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 POGLUT1Q8NBL1 392 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 HM13Q8TCT9 377 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 DUSP19Q8WTR2 217 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 ORAI1Q96D31 301 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 DACH2Q96NX9 599 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 KXD1Q9BQD3 176 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 DCLK3Q9C098 648 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 TAB2Q9NYJ8 693 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 STK39Q9UEW8 545 aa6.32□□□□□ -1.4
LEMD3-206ENST00000545026 ATXN2Q99700 1313 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 TOMM40O96008 361 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 PRLRP16471 622 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 LMO1P25800 156 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 BDKRB2P30411 391 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 APOBEC1P41238 236 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 LIG4P49917 911 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 TMF1P82094 1093 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 MRPS21P82921 87 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 DECR1Q16698 335 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 AMZ1Q400G9 498 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 PAPPA-AS1Q5QFB9 102 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 DCST1Q5T197 706 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 ERMARDQ5T6L9 678 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 KCTD18Q6PI47 426 aaPredicted RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 TECPR1Q7Z6L1 1165 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 CHERPQ8IWX8 916 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 ADAMTS14Q8WXS8 1223 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 PGAP3Q96FM1 320 aaPredicted RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 TXNDC15Q96J42 360 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 CNDP2Q96KP4 475 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 OR10A4Q9H209 315 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 PPIEQ9UNP9 301 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 TRPV2Q9Y5S1 764 aa6.31□□□□□ -1.4
LEMD3-206ENST00000545026 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.31□□□□□ -1.4
LEMD3-206ENST00000545026 GPR75-ASB3A0A0A6YYF3 556 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 TMEM8BA6NDV4 472 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 EIF4E1BA6NMX2 242 aaKnown RBP6.3□□□□□ -1.4
LEMD3-206ENST00000545026 H7C0S8 307 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 SOCS6O14544 535 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 SPINT2O43291 252 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 TPOP07202 933 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 FASLGP48023 281 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 FOXM1Q08050 763 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 ZNF425Q6IV72 752 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 PLPPR4Q7Z2D5 763 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 KRT77Q7Z794 578 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 RASGEF1CQ8N431 466 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 PCDH20Q8N6Y1 951 aaKnown RBP6.3□□□□□ -1.4
LEMD3-206ENST00000545026 OR2AK2Q8NG84 335 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 WFIKKN2Q8TEU8 576 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 ZNF778Q96MU6 729 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 DGAT2Q96PD7 388 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 SLC25A33Q9BSK2 321 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 C1QTNF7Q9BXJ2 289 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 TMEM39BQ9GZU3 492 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 SIL1Q9H173 461 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 DENND2DQ9H6A0 471 aaPredicted RBP6.3□□□□□ -1.4
LEMD3-206ENST00000545026 DNAJC18Q9H819 358 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 CCDC177Q9NQR7 707 aaPredicted RBP6.3□□□□□ -1.4
LEMD3-206ENST00000545026 ZNF148Q9UQR1 794 aa6.3□□□□□ -1.4
LEMD3-206ENST00000545026 hDV102S1A0JD36 115 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms