RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PLEKHM1Q9Y4G2 1056 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 PCDHGA3Q9Y5H0 932 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 IGHV5-10-1A0A0J9YXX1 117 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 BLACEA4D250 179 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 HGSO14964 777 aaPredicted RBP11.79□□□□□ -0.52
GABPB1-206ENST00000543881 IVLP07476 585 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 MMP2P08253 660 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 NFKBIAP25963 317 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 ALDH4A1P30038 563 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 UGT1A3P35503 534 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 ADCY8P40145 1251 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 GPR1P46091 355 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 STC1P52823 247 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 OR1D5P58170 312 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 CTBSQ01459 385 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 TIGD7Q6NT04 549 aaPredicted RBP11.79□□□□□ -0.52
GABPB1-206ENST00000543881 DOK6Q6PKX4 331 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 OR8K1Q8NGG5 319 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 ZDHHC1Q8WTX9 485 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 CTNNBL1Q8WYA6 563 aaPredicted RBP11.79□□□□□ -0.52
GABPB1-206ENST00000543881 AP2M1Q96CW1 435 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 SCARF2Q96GP6 870 aaPredicted RBP11.79□□□□□ -0.52
GABPB1-206ENST00000543881 CATSPER2Q96P56 530 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 CHP1Q99653 195 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 GSDMCQ9BYG8 508 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 DTLQ9NZJ0 730 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 TTLL3Q9Y4R7 772 aa11.79□□□□□ -0.52
GABPB1-206ENST00000543881 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
GABPB1-206ENST00000543881 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 C3orf70A6NLC5 250 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-206ENST00000543881 RHPN2P1A8MT19 583 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-206ENST00000543881 CLDN7O95471 211 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 ECEL1O95672 775 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 KRT7P08729 469 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 TMEM253P0C7T8 217 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 KDELR1P24390 212 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 MAN1A1P33908 653 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 EPHB1P54762 984 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 ILF3Q12906 894 aaKnown RBP eCLIP11.78□□□□□ -0.523e-9■■■□□ 15.7
GABPB1-206ENST00000543881 MESDQ14696 234 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 SLC30A9Q6PML9 568 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 ADAMTSL4Q6UY14 1074 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 ZNF438Q7Z4V0 828 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 NLRP8Q86W28 1048 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 MAP7D3Q8IWC1 876 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 CACNA2D3Q8IZS8 1091 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 NAGSQ8N159 534 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 PLD5Q8N7P1 536 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 SLC35G2Q8TBE7 412 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 KIAA1524Q8TCG1 905 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 HDAC11Q96DB2 347 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 CCDC74BQ96LY2 380 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 RNF157Q96PX1 679 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 WDR24Q96S15 920 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 AMACRQ9UHK6 382 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 PLAAQ9Y263 795 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 PCYT1BQ9Y5K3 369 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-206ENST00000543881 B3GALT1Q9Y5Z6 326 aa11.78□□□□□ -0.52
GABPB1-206ENST00000543881 KCNK1O00180 336 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 JCHAINP01591 159 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 ZNF30P17039 623 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 CES1P23141 567 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 ZBTB17Q13105 803 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 NR1D2Q14995 579 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 CLPPQ16740 277 aaPredicted RBP11.77□□□□□ -0.52
GABPB1-206ENST00000543881 PYCR3Q53H96 274 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 MARK2Q7KZI7 788 aaKnown RBP11.77□□□□□ -0.52
GABPB1-206ENST00000543881 ZNF765Q7L2R6 523 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 CCDC13Q8IYE1 715 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 NDUFAF2Q8N183 169 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 CCNYQ8ND76 341 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 LPCAT1Q8NF37 534 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 ART4Q93070 314 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 COX14Q96I36 57 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 RIOK2Q9BVS4 552 aaKnown RBP11.77□□□□□ -0.52
GABPB1-206ENST00000543881 PCDH9Q9HC56 1237 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 LRRC4CQ9HCJ2 640 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 SPTLC3Q9NUV7 552 aa11.77□□□□□ -0.52
GABPB1-206ENST00000543881 CNOT6Q9ULM6 557 aaKnown RBP11.77□□□□□ -0.52
GABPB1-206ENST00000543881 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 PPM1DO15297 605 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 INPP4BO15327 924 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 CAPN5O15484 640 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 NKX2-8O15522 239 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ZW10O43264 779 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 AKR1B10O60218 316 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 RAD1O60671 282 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 MX2P20592 715 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 CD1CP29017 333 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ACTR1BP42025 376 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 CD86P42081 329 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 LIMK2P53671 638 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ACTR1AP61163 376 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 PPIDQ08752 370 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 TRA2AQ13595 282 aaKnown RBP eCLIP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 QPCTQ16769 361 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 NPNTQ6UXI9 565 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms