RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DNAJB13P59910 316 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 PARP15Q460N3 678 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 UGT3A1Q6NUS8 523 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 LRRC49Q8IUZ0 686 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 AHI1Q8N157 1196 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 RANBP9Q96S59 729 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 VN1R3Q9BXE9 311 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 CACNA2D2Q9NY47 1150 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 SRRDQ9UH36 339 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 FKBPLQ9UIM3 349 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 AP4B1Q9Y6B7 739 aa14.71□□□□□ -0.05
DDX55-209ENST00000542286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 NPEPPSL1A6NEC2 478 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 SUPT3HB4E1H0 165 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 BOLA2-SMG1P6H3BVE0 249 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 ACSL4O60488 711 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 RPP40O75818 363 aaKnown RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 PRLP01236 227 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 RBP1P09455 135 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 CDH2P19022 906 aaPredicted RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 IMPDH1P20839 514 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 GKP32189 559 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 CAPRIN1Q14444 709 aaKnown RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 KIF19Q2TAC6 998 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 C18orf21Q32NC0 220 aaPredicted RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 GLT6D1Q7Z4J2 308 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 RETREG3Q86VR2 466 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 FUNDC1Q8IVP5 155 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 SIDT2Q8NBJ9 832 aaKnown RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 GFM2Q969S9 779 aaKnown RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 SLC22A12Q96S37 553 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 GPR21Q99679 349 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 CINPQ9BW66 212 aaPredicted RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 TUBB1Q9H4B7 451 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 ZNF696Q9H7X3 374 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 MEAF6Q9HAF1 191 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 TLR9Q9NR96 1032 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 HEMK1Q9Y5R4 338 aaPredicted RBP14.71□□□□□ -0.06
DDX55-209ENST00000542286 SQORQ9Y6N5 450 aa14.71□□□□□ -0.06
DDX55-209ENST00000542286 SLCO1B7G3V0H7 640 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 H3BNC9 293 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 NR5A2O00482 541 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 CORO1AP31146 461 aaKnown RBP14.7□□□□□ -0.06
DDX55-209ENST00000542286 PLD1Q13393 1074 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 NRF1Q16656 503 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 VPS26BQ4G0F5 336 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 C6orf52Q5T4I8 152 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 ATXN7L2Q5T6C5 722 aaPredicted RBP14.7□□□□□ -0.06
DDX55-209ENST00000542286 DDI1Q8WTU0 396 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 C19orf60Q96EN9 201 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 TSPAN17Q96FV3 270 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 CDK15Q96Q40 435 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 TRIB3Q96RU7 358 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 ACOX2Q99424 681 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 TTPALQ9BTX7 342 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 RAB26Q9ULW5 256 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 CEPT1Q9Y6K0 416 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 K7ERQ8 282 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 ACOT8O14734 319 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 SELPP16109 830 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 CTPS1P17812 591 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 ITGB6P18564 788 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 CA5AP35218 305 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 ATP5C1P36542 298 aaKnown RBP14.7□□□□□ -0.06
DDX55-209ENST00000542286 CD97P48960 835 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 NR1H2P55055 460 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 CDKL1Q00532 357 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 BORAQ6PGQ7 559 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDX55-209ENST00000542286 BRSK1Q8TDC3 778 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 YIPF2Q9BWQ6 316 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 C6orf203Q9P0P8 240 aaPredicted RBP14.7□□□□□ -0.06
DDX55-209ENST00000542286 THEGQ9P2T0 379 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 PSMD13Q9UNM6 376 aa14.7□□□□□ -0.06
DDX55-209ENST00000542286 FAF1Q9UNN5 650 aaPredicted RBP14.7□□□□□ -0.06
DDX55-209ENST00000542286 OR6C75A6NL08 312 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 SRP72O76094 671 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 PAPSS2O95340 614 aaPredicted RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 MZF1P28698 734 aaPredicted RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 EEF1DP29692 281 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 KPNA2P52292 529 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 STC1P52823 247 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 DIO3P55073 304 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 OXCT1P55809 520 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 PTPRNQ16849 979 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 UGT3A2Q3SY77 523 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 HABP4Q5JVS0 413 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 MUC3BQ9H195 1237 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 FAIMQ9NVQ4 179 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 UBA2Q9UBT2 640 aaPredicted RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 ANKRD36A6QL64 1941 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 CLASP2O75122 1294 aaKnown RBP14.69□□□□□ -0.06
DDX55-209ENST00000542286 FGF1P05230 155 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 FAM58BPP0C7Q3 252 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 UGT1A6P19224 532 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 HERVK_113P63132 956 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 APOFQ13790 326 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 LRP8Q14114 963 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 SLC14A2Q15849 920 aa14.69□□□□□ -0.06
DDX55-209ENST00000542286 RNF219Q5W0B1 726 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms