RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GOT2P00505 430 aaKnown RBP11.52□□□□□ -0.56
USP35-207ENST00000530546 JUNP05412 331 aaKnown RBP11.52□□□□□ -0.56
USP35-207ENST00000530546 TFEBP19484 476 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 NEK2P51955 445 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 CDKN2DP55273 166 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 C21orf59P57076 290 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 ESRRGP62508 458 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 LINGO4Q6UY18 593 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 KIAA0408Q6ZU52 694 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 GPR180Q86V85 440 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 CENPSQ8N2Z9 138 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 PDCD6IPQ8WUM4 868 aaKnown RBP11.52□□□□□ -0.56
USP35-207ENST00000530546 PLEKHA8Q96JA3 519 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 HEPHQ9BQS7 1158 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 RTKNQ9BST9 563 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 CWH43Q9H720 699 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 PDFQ9HBH1 243 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 COMMD8Q9NX08 183 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 GNPTGQ9UJJ9 305 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 DOLKQ9UPQ8 538 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 MYRFQ9Y2G1 1151 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 VWA7Q9Y334 891 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 MROH6A6NGR9 719 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 SLC7A4O43246 635 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 STC2O76061 302 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 CSPG5O95196 566 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 HMGA1P17096 107 aaKnown RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 KCNA5P22460 613 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 LEPRP48357 1165 aaKnown RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 CLCN5P51795 746 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 CDKL1Q00532 357 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 FAM83EQ2M2I3 478 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 ANKDD1AQ495B1 522 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 GPR158Q5T848 1215 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 TMEM198Q66K66 360 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 LSMEM2Q8N112 164 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 FATE1Q969F0 183 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 DHRS1Q96LJ7 313 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 NSMCE3Q96MG7 304 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 MRPL57Q9BQC6 102 aaKnown RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 PAIP1Q9H074 479 aaKnown RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 MUC3BQ9H195 1237 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 H3BNH8 94 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 PRRG1O14668 218 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 HDAC3O15379 428 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 S1PR4O95977 384 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 FUCA1P04066 466 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 TSPAN8P19075 237 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 RPS3AP61247 264 aaKnown RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 PRKAA1Q13131 559 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 RNF219Q5W0B1 726 aaPredicted RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 GPR141Q7Z602 305 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 TMIGD2Q96BF3 282 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 EFHD2Q96C19 240 aaPredicted RBP11.52□□□□□ -0.57
USP35-207ENST00000530546 ISOC1Q96CN7 298 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 FEM1CQ96JP0 617 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 MFSD1Q9H3U5 465 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 ALG9Q9H6U8 611 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 PNPLA3Q9NST1 481 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 GIN1Q9NXP7 522 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 SEPT3Q9UH03 358 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 YIPF1Q9Y548 306 aa11.52□□□□□ -0.57
USP35-207ENST00000530546 MKI67P46013 3256 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 A0A0U1RQS6 177 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 K7EPI3 171 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 GRID2O43424 1007 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 CNOT3O75175 753 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 PAPSS2O95340 614 aaPredicted RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 GLP2RO95838 553 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 FGF1P05230 155 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 LTA4HP09960 611 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 POLD2P49005 469 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 APLP1P51693 650 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 CDH4P55283 916 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 KLF10Q13118 480 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 IKBKEQ14164 716 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 SEMA3AQ14563 771 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 PTPRRQ15256 657 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 CYTH1Q15438 398 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 LSM12Q3MHD2 195 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 AGAP9Q5VTM2 703 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 TMEM207Q6UWW9 146 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 TERB1Q8NA31 727 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 STARD8Q92502 1023 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 OSBPL11Q9BXB4 747 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 MAGEH1Q9H213 219 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 AFF4Q9UHB7 1163 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 AGO1Q9UL18 857 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 PCDHGC4Q9Y5F7 938 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 SPO11Q9Y5K1 396 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 MIA3Q5JRA6 1907 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 UBA6A0AVT1 1052 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms