RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ARMC8Q8IUR7 673 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 SMAP1Q8IYB5 467 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 METTL6Q8TCB7 284 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 TAAR8Q969N4 342 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 MMABQ96EY8 250 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 LINGO1Q96FE5 620 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 PERPQ96FX8 193 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 NEUROD6Q96NK8 337 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 LRRC1Q9BTT6 524 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 HCFC1R1Q9NWW0 138 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 DDX43Q9NXZ2 648 aaKnown RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 FBXL2Q9UKC9 423 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 SLC13A4Q9UKG4 626 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 ACSL5Q9ULC5 683 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 A0A1W2PQF6 199 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 CTAGE9A4FU28 777 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 EIF3CLB5ME19 914 aaKnown RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 M0QZ24 198 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZNHIT1O43257 154 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 APOHP02749 345 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 CTAGE8P0CG41 777 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 UBL4AP11441 157 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZNF182P17025 639 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 RARSP54136 660 aaKnown RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 ATP12AP54707 1039 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 RPL24P83731 157 aaKnown RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 SREBF2Q12772 1141 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 TMEM115Q12893 351 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 DCST1Q5T197 706 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 PDSS1Q5T2R2 415 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 TTI2Q6NXR4 508 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 INO80CQ6PI98 192 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 CACNA2D4Q7Z3S7 1137 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 GPR180Q86V85 440 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 MAP7D3Q8IWC1 876 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 CTAGE4Q8IX94 777 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 ADSSL1Q8N142 457 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 METTL27Q8N6F8 245 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 KLHDC9Q8NEP7 349 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 MORC4Q8TE76 937 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 FBXO17Q96EF6 278 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZNF354BQ96LW1 612 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 SMC6Q96SB8 1091 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 PRKRIP1Q9H875 184 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 LTB4R2Q9NPC1 389 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 UBN1Q9NPG3 1134 aa3.25□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM90A26D6RGX4 464 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM72CH0Y354 149 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 TMEM178BH3BS89 294 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 ANKRD28O15084 1053 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 EIF3DO15371 548 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 PAGE4O60829 102 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM106CPP0CH98 169 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 CDKN1AP38936 164 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 ARL1P40616 181 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 UBA7P41226 1012 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FASLGP48023 281 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 OLR1P78380 273 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 CDC16Q13042 620 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 OLIG2Q13516 323 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 DCTN2Q13561 401 aaKnown RBP3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 C14orf177Q52M58 125 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 TMEM35AQ53FP2 167 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM72AQ5TYM5 149 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM72DQ6L9T8 149 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FBXL22Q6P050 247 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 DGLUCYQ7Z3D6 616 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 R3HCC1LQ7Z5L2 792 aaKnown RBP3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM72BQ86X60 149 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 RBM15BQ8NDT2 890 aaKnown RBP3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZNF524Q96C55 264 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 INTS12Q96CB8 462 aaKnown RBP3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 ST6GAL2Q96JF0 529 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 WDFY2Q96P53 400 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 PIGMQ9H3S5 423 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 POLR1BQ9H9Y6 1135 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 TAS2R10Q9NYW0 307 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 KLHL9Q9P2J3 617 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 COPG2Q9UBF2 871 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 TCF19Q9Y242 345 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 CLIC4Q9Y696 253 aa3.24□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZCWPW2A0A1B0GU75 182 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 A0A1W2PP11 408 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 C5orf60A6NFR6 353 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 HS3ST1O14792 307 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 IGHV4-39P01824 125 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 PRSS1P07477 247 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 HOXC9P31274 260 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 DCTP40126 519 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 PLIN5Q00G26 463 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 GRIK2Q13002 908 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 MAD2L1Q13257 205 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 KRTCAP3Q53RY4 240 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 PAPD4Q6PIY7 484 aaKnown RBP3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 CYP20A1Q6UW02 462 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 ATF7IPQ6VMQ6 1270 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 TMEM116Q8NCL8 245 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 TMEM255BQ8WV15 326 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 NEURL2Q9BR09 285 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms