RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 GCH1P30793 250 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 CCKARP32238 428 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 SLC15A1P46059 708 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ENTPD1P49961 510 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 PNLIPRP2P54317 469 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 SEC61BP60468 96 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 MRPS5P82675 430 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ZBED6P86452 979 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ECT2LQ008S8 904 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 GOLGA8DPQ0D2H9 430 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ILF3Q12906 894 aaKnown RBP eCLIP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 CHAF1BQ13112 559 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 OASLQ15646 514 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 KRTCAP3Q53RY4 240 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 RILPL1Q5EBL4 403 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 FRG2Q64ET8 278 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 RPUSD3Q6P087 351 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ZNF549Q6P9A3 640 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 BRAT1Q6PJG6 821 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 SDCCAG8Q86SQ7 713 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ADIPOR2Q86V24 386 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ZNF34Q8IZ26 560 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 OR8H2Q8N162 312 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 C17orf53Q8N3J3 647 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 RASGEF1CQ8N431 466 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 POC5Q8NA72 575 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 SLC38A9Q8NBW4 561 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 SMRP1Q8NCR6 262 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 HMGCLL1Q8TB92 370 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 DUSP19Q8WTR2 217 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 FAM216AQ8WUB2 273 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 POMGNT1Q8WZA1 660 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 TAAR8Q969N4 342 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 PHF21BQ96EK2 531 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ABHD1Q96SE0 405 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 CSF3RQ99062 836 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 PCGF1Q9BSM1 259 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 NDST4Q9H3R1 872 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 TRMT1Q9NXH9 659 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 TSPYL4Q9UJ04 414 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 FBXW11Q9UKB1 542 aa2.28□□□□□ -2.04
ITGB1-213ENST00000484088 EXO1Q9UQ84 846 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 PTRH2Q9Y3E5 179 aaKnown RBP2.28□□□□□ -2.04
ITGB1-213ENST00000484088 ASTN2O75129 1339 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 ZNF541Q9H0D2 1346 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 LINC01553A4QN01 128 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GLOD5A6NK44 160 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 CTDSP2O14595 271 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 MAP2K7O14733 419 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 P4HA2O15460 535 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 ASAP2O43150 1006 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 HS6ST1O60243 411 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PLOD3O60568 738 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 HNRNPCL1O60812 293 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 RFPL2O75678 378 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 TOMM70O94826 608 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 OAZ2O95190 189 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 CSPG5O95196 566 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GLUD1P00367 558 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 EGFP01133 1207 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 DNTTP04053 509 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PTMAP06454 111 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 HOXC6P09630 235 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 HLA-DOBP13765 273 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 S1PR1P21453 382 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 RPL3P39023 403 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 EIF2DP41214 584 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 NRIP1P48552 1158 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GLUD2P49448 558 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PCYT1AP49585 367 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PLCD1P51178 756 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PPP5CP53041 499 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 MFAP4P55083 255 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 CLDN20P56880 219 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 CSNK2A1P68400 391 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 ACSM2AQ08AH3 577 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 KIF5AQ12840 1032 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 ZNF155Q12901 538 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GRIK2Q13002 908 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GRAPQ13588 217 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 BAATQ14032 418 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 NEDD9Q14511 834 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PNLIPRP3Q17RR3 467 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GARNL3Q5VVW2 1013 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 KRT79Q5XKE5 535 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 ACSM2BQ68CK6 577 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 C18orf63Q68DL7 685 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 SIGIRRQ6IA17 410 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 DUS1LQ6P1R4 473 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PAPD4Q6PIY7 484 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GFRALQ6UXV0 394 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 SLC36A4Q6YBV0 504 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 GSTA5Q7RTV2 222 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 CACNA2D4Q7Z3S7 1137 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PRPF39Q86UA1 669 aaKnown RBP2.27□□□□□ -2.05
ITGB1-213ENST00000484088 PALB2Q86YC2 1186 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 HACE1Q8IYU2 909 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 SCYL3Q8IZE3 742 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 C1orf87Q8N0U7 546 aa2.27□□□□□ -2.05
ITGB1-213ENST00000484088 CSNK2A3Q8NEV1 391 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms