RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 PLEKHG4BQ96PX9 1271 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 SRPK1Q96SB4 655 aaKnown RBP12.89□□□□□ -0.35
PTMA-211ENST00000468027 TMEM121Q9BTD3 319 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 CDH19Q9H159 772 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 CARS2Q9HA77 564 aaKnown RBP12.89□□□□□ -0.35
PTMA-211ENST00000468027 SPATS2LQ9NUQ6 558 aaKnown RBP12.89□□□□□ -0.35
PTMA-211ENST00000468027 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 VPS18Q9P253 973 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 ZKSCAN5Q9Y2L8 839 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 TMEM98Q9Y2Y6 226 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 PLEKHM1Q9Y4G2 1056 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 CHD6Q8TD26 2715 aa12.89□□□□□ -0.35
PTMA-211ENST00000468027 MGAQ8IWI9 3026 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 FAM149AA5PLN7 773 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 PRR19A6NJB7 356 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 INPP4BO15327 924 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 OPA1O60313 960 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 ZNF189O75820 626 aaPredicted RBP12.88□□□□□ -0.35
PTMA-211ENST00000468027 ATP1A1P05023 1023 aaKnown RBP12.88□□□□□ -0.35
PTMA-211ENST00000468027 PROS1P07225 676 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 DAB2P98082 770 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 E2F1Q01094 437 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 CTBSQ01459 385 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 HLTFQ14527 1009 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTMA-211ENST00000468027 NR0B2Q15466 257 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 TCEA2Q15560 299 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
PTMA-211ENST00000468027 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 PDPK2PQ6A1A2 396 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 TRAM1L1Q8N609 369 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 ARL10Q8N8L6 244 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 AAR2Q9Y312 384 aaKnown RBP12.88□□□□□ -0.35
PTMA-211ENST00000468027 ADAMTS20P59510 1910 aa12.88□□□□□ -0.35
PTMA-211ENST00000468027 GOLGA6CA6NDK9 693 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 GOLGA6BA6NDN3 693 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 NTN3O00634 580 aaPredicted RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 CHUKO15111 745 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 NRDCO43847 1150 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 GOLGA6DP0CG33 693 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 AK4P27144 223 aaPredicted RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 GNPDA1P46926 289 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 PARP6Q2NL67 630 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 ATP13A5Q4VNC0 1218 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 SEL1L2Q5TEA6 688 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 DRICH1Q6PGQ1 229 aaPredicted RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 EFL1Q7Z2Z2 1120 aaKnown RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 GLIS1Q8NBF1 620 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 VPS35Q96QK1 796 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 C19orf43Q9BQ61 176 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 FRMD8P1Q9BZ68 369 aaPredicted RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 RAD18Q9NS91 495 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 GOLGA6AQ9NYA3 693 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 HACD3Q9P035 362 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 ATXN10Q9UBB4 475 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 PADI4Q9UM07 663 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 GPR34Q9UPC5 381 aa12.87□□□□□ -0.35
PTMA-211ENST00000468027 URB1O60287 2271 aaKnown RBP12.87□□□□□ -0.35
PTMA-211ENST00000468027 SMG1Q96Q15 3661 aaKnown RBP12.86□□□□□ -0.35
PTMA-211ENST00000468027 A6NCN8 305 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 AGAP14A8MT82 685 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 TAF4O00268 1085 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 NUAK1O60285 661 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 USP12O75317 370 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 PSMA3P25788 255 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 STIP1P31948 543 aaKnown RBP12.86□□□□□ -0.35
PTMA-211ENST00000468027 PDX1P52945 283 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 TARDBPQ13148 414 aaKnown RBP eCLIP12.86□□□□□ -0.356e-13■□□□□ 9.1
PTMA-211ENST00000468027 SPARCL1Q14515 664 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 P3H1Q32P28 736 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 CCDC157Q569K6 752 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 CERCAMQ5T4B2 595 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 ZNF648Q5T619 568 aaPredicted RBP12.86□□□□□ -0.35
PTMA-211ENST00000468027 ALS2CLQ60I27 953 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 DOK6Q6PKX4 331 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 ZNF438Q7Z4V0 828 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 ADGRG6Q86SQ4 1221 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 NAGSQ8N159 534 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 C1orf54Q8WWF1 131 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 GLYATL1Q969I3 302 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 TBL1YQ9BQ87 522 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 FERMT1Q9BQL6 677 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 SPATA16Q9BXB7 569 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 RMI1Q9H9A7 625 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 TRIM39Q9HCM9 518 aa12.86□□□□□ -0.35
PTMA-211ENST00000468027 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms