RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 DOLKQ9UPQ8 538 aa10.03□□□□□ -0.8
RFX3-210ENST00000457373 ZKSCAN5Q9Y2L8 839 aa10.03□□□□□ -0.8
RFX3-210ENST00000457373 TMEM98Q9Y2Y6 226 aa10.03□□□□□ -0.8
RFX3-210ENST00000457373 MYLKQ15746 1914 aa10.03□□□□□ -0.8
RFX3-210ENST00000457373 GVINP1Q7Z2Y8 2422 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 RGSL1A5PLK6 1076 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 NEMP2A6NFY4 417 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 PCNX2A6NKB5 2137 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 FADS2P1A8MWK0 482 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 E7EVH7 732 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 PGRMC1O00264 195 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 TRIM38O00635 465 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 STX7O15400 261 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 SIGLEC6O43699 453 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 ANXA6P08133 673 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 ALPPL2P10696 532 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 TPH1P17752 444 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 TCP1P17987 556 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 TEAD1P28347 426 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 POLD2P49005 469 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 TERF1P54274 439 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 PTPRCAPQ14761 206 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 TRIP13Q15645 432 aaPredicted RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 OCLNQ16625 522 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 HENMT1Q5T8I9 393 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 KCTD11Q693B1 232 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 DENND5AQ6IQ26 1287 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 ADAMTSL4Q6UY14 1074 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 MARK2Q7KZI7 788 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 ZNF548Q8NEK5 533 aaPredicted RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 BAHD1Q8TBE0 780 aaPredicted RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 MAGOHBQ96A72 148 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 HIC2Q96JB3 615 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 CAPZA3Q96KX2 299 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 NAP1L3Q99457 506 aaPredicted RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 CDC6Q99741 560 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 NAPGQ99747 312 aaPredicted RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 LRRC61Q9BV99 259 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 CLPBQ9H078 707 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 LRRC40Q9H9A6 602 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 CARS2Q9HA77 564 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 FGF22Q9HCT0 170 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 RAB6BQ9NRW1 208 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 RAD18Q9NS91 495 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 PIH1D1Q9NWS0 290 aaKnown RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 IL17CQ9P0M4 197 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 TTC7AQ9ULT0 858 aaPredicted RBP10.02□□□□□ -0.81
RFX3-210ENST00000457373 KCTD3Q9Y597 815 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 CABIN1Q9Y6J0 2220 aa10.02□□□□□ -0.81
RFX3-210ENST00000457373 PRSS38A1L453 326 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 C2orf81A6NN90 581 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 CES2O00748 559 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 TNFRSF10CO14798 259 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 TNFSF14O43557 240 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 AP2A1O95782 977 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 KRT14P02533 472 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 FUCA1P04066 466 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 CEACAM5P06731 702 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 GIMD1P0DJR0 217 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 MYF5P13349 255 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 LPOP22079 712 aaPredicted RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 HMGCLP35914 325 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 COILP38432 576 aaPredicted RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 SPAM1P38567 509 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 GNPDA1P46926 289 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 VPS41P49754 854 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 BASP1P80723 227 aaKnown RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 TMPRSS15P98073 1019 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 DAB2P98082 770 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 DNAJC3Q13217 504 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 ELOCQ15369 112 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 TAF1AQ15573 450 aaPredicted RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 ZNF648Q5T619 568 aaPredicted RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 TTC27Q6P3X3 843 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 PPP1R21Q6ZMI0 780 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 ERMP1Q7Z2K6 904 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 KLHDC8BQ8IXV7 354 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 TRAM1L1Q8N609 369 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 PNPLA1Q8N8W4 532 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 DNAAF3Q8N9W5 541 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 OR52K1Q8NGK4 314 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 OR4C6Q8NH72 309 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 BRSK1Q8TDC3 778 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 ACTRT1Q8TDG2 376 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 FRMD8Q9BZ67 464 aaPredicted RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 TMEM168Q9H0V1 697 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 ARNT2Q9HBZ2 717 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 ARFGAP3Q9NP61 516 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 NLGN3Q9NZ94 848 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.01□□□□□ -0.81
RFX3-210ENST00000457373 CNOT6Q9ULM6 557 aaKnown RBP10.01□□□□□ -0.81
RFX3-210ENST00000457373 SUFUQ9UMX1 484 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 PKP3Q9Y446 797 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 ARL5AQ9Y689 179 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 CSNK1G3Q9Y6M4 447 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 DGKBQ9Y6T7 804 aa10.01□□□□□ -0.81
RFX3-210ENST00000457373 COL5A1P20908 1838 aaPredicted RBP10□□□□□ -0.81
RFX3-210ENST00000457373 PIEZO1Q92508 2521 aa10□□□□□ -0.81
RFX3-210ENST00000457373 GLYATL1P3A0A0U1RQE8 302 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms