RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ERRFI1Q9UJM3 462 aaPredicted RBP17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 KCND3Q9UK17 655 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 PPIL1Q9Y3C6 166 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 ZFHX3Q15911 3703 aa17.02■□□□□ 0.31
UBE2D4-209ENST00000454428 C2CD3Q4AC94 2353 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 A0A1W2PQ67 120 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 EEF2KO00418 725 aaKnown RBP17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 NDUFA10O95299 355 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 LDLRP01130 860 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 CTPS1P17812 591 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 ERCC2P18074 760 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 TNFRSF8P28908 595 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 RENBPP51606 427 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 PTSQ03393 145 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 DNASE1L3Q13609 305 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 INPP5JQ15735 1006 aaPredicted RBP17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 CLEC16AQ2KHT3 1053 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 TMCO4Q5TGY1 634 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 PAPD7Q5XG87 772 aaKnown RBP17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 Q8NA96 180 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 CT55Q8WUE5 264 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 PIH1D2Q8WWB5 315 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 SH3KBP1Q96B97 665 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 OR6C1Q96RD1 312 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 NUDCD1Q96RS6 583 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 PEBP4Q96S96 227 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 KCTD15Q96SI1 283 aaPredicted RBP17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 DONSONQ9NYP3 566 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 CPNE7Q9UBL6 633 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 CNOT6Q9ULM6 557 aaKnown RBP17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 SRPK3Q9UPE1 567 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 KCNK6Q9Y257 313 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 CELSR1Q9NYQ6 3014 aa17.01■□□□□ 0.31
UBE2D4-209ENST00000454428 ADGRG4Q8IZF6 3080 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 POLQO75417 2590 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 LILRA5A6NI73 299 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 EPHB6O15197 1021 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 INPP4BO15327 924 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 PGLSO95336 258 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 TIAF1O95411 115 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 ATP1A1P05023 1023 aaKnown RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 NSFP46459 744 aaKnown RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 KLK7P49862 253 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 SEPHS1P49903 392 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 PGDP52209 483 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 UBE2IP63279 158 aaKnown RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 CHAF1BQ13112 559 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 LAMB3Q13751 1172 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 IL11RAQ14626 422 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 C1QL3Q5VWW1 255 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 LRRC66Q68CR7 880 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 RFX8Q6ZV50 586 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 CYP4V2Q6ZWL3 525 aaPredicted RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 CHST15Q7LFX5 561 aaPredicted RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 SLC9B2Q86UD5 537 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 NLRP8Q86W28 1048 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 PLXDC1Q8IUK5 500 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 LZTR1Q8N653 840 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 ARFGAP1Q8N6T3 406 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 ELMO2Q96JJ3 720 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 MGME1Q9BQP7 344 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 EPB41L1Q9H4G0 881 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 ACTL8Q9H568 366 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 ZNF768Q9H5H4 540 aaKnown RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 AKIRIN1Q9H9L7 192 aaPredicted RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 ZNHIT2Q9UHR6 403 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 PCDHGA9Q9Y5G4 932 aaKnown RBP17■□□□□ 0.31
UBE2D4-209ENST00000454428 SLC30A1Q9Y6M5 507 aa17■□□□□ 0.31
UBE2D4-209ENST00000454428 SPAG6O75602 509 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 CALB1P05937 261 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 PDHA1P08559 390 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 FGF5P12034 268 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 F3P13726 295 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 SOX5P35711 763 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 GARSP41250 739 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 LEPRP48357 1165 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 DNAJC24Q6P3W2 148 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 ZNF765Q7L2R6 523 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 RASGRP3Q8IV61 690 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 ZNF599Q96NL3 588 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 WDR24Q96S15 920 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 HERPUD2Q9BSE4 406 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 SLC25A23Q9BV35 468 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 LHX9Q9NQ69 397 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 CNOT8Q9UFF9 292 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 LNPEPQ9UIQ6 1025 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 PADI1Q9ULC6 663 aa16.99■□□□□ 0.31
UBE2D4-209ENST00000454428 KIF1CO43896 1103 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 FZD6O60353 706 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 SNX2O60749 519 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 ACP5P13686 325 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 TYRP1P17643 537 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 MAXP61244 160 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 RPS18P62269 152 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 IL10RAQ13651 578 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms