RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TM7SF2O76062 418 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 LATS1O95835 1130 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 HLA-DQB2P05538 268 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 QPCTQ16769 361 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 SAMD11Q96NU1 681 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 SLC2A13Q96QE2 648 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 NRP2O60462 931 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 C8AP07357 584 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 OCM2P0CE71 109 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 OCMP0CE72 109 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 HPGDP15428 266 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CCNFP41002 786 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 SPIDRQ14159 915 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 TPD52L3Q96J77 140 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 HSD17B2P37059 387 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 GAD2Q05329 585 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 RFTN2Q52LD8 501 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 MTX3Q5HYI7 312 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 CAB39LQ9H9S4 337 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 TRPC4Q9UBN4 977 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 A0A087WXM4 84 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 MT-CYBP00156 380 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 BNIP1Q12981 228 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 GPR17Q13304 367 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 RFX4Q33E94 735 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 DSELQ8IZU8 1212 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 CYP11A1P05108 521 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 NUMBP49757 651 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 USP7Q93009 1102 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 MFSD3Q96ES6 412 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 HS3ST4Q9Y661 456 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SPTLC1O15269 473 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 GSC2O15499 205 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 CNOT3O75175 753 aaKnown RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 DNTTP04053 509 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 ANPEPP15144 967 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SLC1A2P43004 574 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 ALDH6A1Q02252 535 aaKnown RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 GTF2H2Q13888 395 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 HERC3Q15034 1050 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 INO80DQ53TQ3 878 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 GTF2H2CQ6P1K8 395 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 CNSTQ6PJW8 725 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SLC30A8Q8IWU4 369 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 TBC1D21Q8IYX1 336 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 AHI1Q8N157 1196 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SLC12A4Q9UP95 1085 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 PDE5AO76074 875 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 APLP1P51693 650 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 USP4Q13107 963 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 PYDC1Q8WXC3 89 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 AHCYL2Q96HN2 611 aaKnown RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 BRCA1P38398 1863 aaKnown RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 A0A0J9YYE9 177 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 DHRS12A0PJE2 317 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 NDUFS2O75306 463 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 STK16O75716 305 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 KCNJ2P63252 427 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 SAMD4AQ9UPU9 718 aaKnown RBP11.48□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
PTCH1-208ENST00000430669 CFHP08603 1231 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 PIRTP0C851 137 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 CTSEP14091 401 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 HNRNPLP14866 589 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 PRKCHP24723 683 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 MRPS22P82650 360 aaKnown RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 IYDQ6PHW0 289 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 CHSY3Q70JA7 882 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 KREMEN2Q8NCW0 462 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 TWIST2Q8WVJ9 160 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 NXNL1Q96CM4 212 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 SEPHS2Q99611 448 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 BCAS3Q9H6U6 928 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 A8MX80 341 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ABCB1P08183 1280 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 GRIA3P42263 894 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ZSCAN5AQ9BUG6 496 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 POPDC3Q9HBV1 291 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ANKRD36A6QL64 1941 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 MBLAC1A4D2B0 266 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 KDELR3O43731 214 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 LINC00032P0C843 101 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ABCG1P45844 678 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 POLR2JP52435 117 aaKnown RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 MLLT6P55198 1093 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ECT2LQ008S8 904 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 PLIN5Q00G26 463 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 RFWD3Q6PCD5 774 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 DNAJB7Q7Z6W7 309 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 GJD3Q8N144 294 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 RIPOR3Q96MK2 946 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 PHPT1Q9NRX4 125 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 SOD2P04179 222 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms