RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 TRIM17Q9Y577 477 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 DYTNA2CJ06 578 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 A8MT66 165 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 GABRDO14764 452 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 SYN3O14994 580 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 SOX6P35712 828 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ALDH6A1Q02252 535 aaKnown RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 MAPK11Q15759 364 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 UPF1Q92900 1129 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNED1-204ENST00000401884 TUBGCP5Q96RT8 1024 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 KRT84Q9NSB2 600 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 DAPK2Q9UIK4 370 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ZFP37Q9Y6Q3 630 aaPredicted RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 FAM72CH0Y354 149 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 PROZP22891 400 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 HSPA7P48741 367 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 RBM20Q5T481 1227 aaKnown RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 FAM72AQ5TYM5 149 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 FAM72DQ6L9T8 149 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 TAPT1Q6NXT6 567 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ZCCHC8Q6NZY4 707 aaKnown RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 EPGNQ6UW88 154 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 FAM72BQ86X60 149 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ATL1Q8WXF7 558 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 KLHL25Q9H0H3 589 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 COQ10BQ9H8M1 238 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 TRMT13Q9NUP7 481 aaKnown RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 TTC24A2A3L6 582 aaPredicted RBP17.58■□□□□ 0.41
SNED1-204ENST00000401884 STBD1O95210 358 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 KRT20P35900 424 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 HPCAL1P37235 193 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 POM121L1PQ3SYA9 428 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 FBXL22Q6P050 247 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 ROPN1LQ96C74 230 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 TLR6Q9Y2C9 796 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 TDRKHQ9Y2W6 561 aaKnown RBP17.58■□□□□ 0.41
SNED1-204ENST00000401884 ARL5AQ9Y689 179 aa17.58■□□□□ 0.41
SNED1-204ENST00000401884 PCDH8O95206 1070 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 CAPN1P07384 714 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 UROSP10746 265 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 PPP2R1BP30154 601 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 CRATP43155 626 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 LYPLAL1Q5VWZ2 237 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 CORO1BQ9BR76 489 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 EIF2B4Q9UI10 523 aaKnown RBP17.58■□□□□ 0.4
SNED1-204ENST00000401884 RPS6KA6Q9UK32 745 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 GMPPBQ9Y5P6 360 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 ITGB4P16144 1822 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 TRAV19A0A0A6YYK7 116 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 J3KR12 359 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 MATN2O00339 956 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 KPNA5O15131 536 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 STK16O75716 305 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 CKMT2P17540 419 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 OGNP20774 298 aaKnown RBP17.58■□□□□ 0.4
SNED1-204ENST00000401884 IMPDH1P20839 514 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 GABRR2P28476 465 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 RPS24P62847 133 aaKnown RBP17.58■□□□□ 0.4
SNED1-204ENST00000401884 INO80DQ53TQ3 878 aaPredicted RBP17.58■□□□□ 0.4
SNED1-204ENST00000401884 DPY19L2P1Q6NXN4 242 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 PAQR3Q6TCH7 311 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 REPS1Q96D71 796 aa17.58■□□□□ 0.4
SNED1-204ENST00000401884 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 FAM220BPB1ANY3 271 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 EDN1P05305 212 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 CDH4P55283 916 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 SOX4Q06945 474 aaPredicted RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 FGD3Q5JSP0 725 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 CACUL1Q86Y37 369 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 CROCCP3Q8IVE0 287 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 PHACTR4Q8IZ21 702 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 ENDOVQ8N8Q3 282 aaKnown RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 NAT14Q8WUY8 206 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 CENPNQ96H22 339 aaPredicted RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 CEP44Q9C0F1 390 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 ZNF490Q9ULM2 529 aaPredicted RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 CITO14578 2027 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 H3BN98 237 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 BEST1O76090 585 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 OCM2P0CE71 109 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 OCMP0CE72 109 aaPredicted RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 ABRQ12979 859 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 CCDC142Q17RM4 750 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 XKR6Q5GH73 641 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 FBXL19Q6PCT2 694 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 METTL3Q86U44 580 aaKnown RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 OR7A2PQ8NGA2 310 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 SAMHD1Q9Y3Z3 626 aaKnown RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 PDZK1P1A8MUH7 402 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 PRAMEF1O95521 474 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 GPIP06744 558 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 CNPP09543 421 aaKnown RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 IQCF3P0C7M6 154 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 SLC16A1P53985 500 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 MSANTD2Q6P1R3 559 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 PGBD3Q8N328 593 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 GPR156Q8NFN8 814 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 APOLD1Q96LR9 279 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 C6orf62Q9GZU0 229 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms