RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 ATP13A5Q4VNC0 1218 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM98BQ52LJ0 330 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TAF1BQ53T94 588 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PRR16Q569H4 304 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM47CQ5HY64 1035 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 LIN54Q6MZP7 749 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ANKRD26P1Q6NSI1 321 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM111BQ6SJ93 734 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KLHL24Q6TFL4 600 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 C5orf46Q6UWT4 87 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ENOSF1Q7L5Y1 443 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 APTXQ7Z2E3 356 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NEK8Q86SG6 692 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RNF180Q86T96 592 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TAC4Q86UU9 113 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 IGFN1Q86VF2 1251 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 C12orf40Q86WS4 652 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TRIM69Q86WT6 500 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HIPK1Q86Z02 1210 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SRRM1Q8IYB3 904 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TCTE3Q8IZS6 198 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PDIK1LQ8N165 341 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CYP4Z2PQ8N1L4 340 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NLGN1Q8N2Q7 840 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MB21D1Q8N884 522 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 C3orf58Q8NDZ4 430 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 URGCPQ8TCY9 931 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAGEE2Q8TD90 523 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ACTRT2Q8TDY3 377 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AKAP1Q92667 903 aaKnown RBP eCLIP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 STAMQ92783 540 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DPF2Q92785 391 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GLG1Q92896 1179 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RPL3LQ92901 407 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLCO2A1Q92959 643 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 USP13Q92995 863 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TESCQ96BS2 214 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PTCD3Q96EY7 689 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DUS3LQ96G46 650 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMEM41AQ96HV5 264 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SERAC1Q96JX3 654 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 LURAP1Q96LR2 239 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HYLS1Q96M11 299 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FANCD2OSQ96PS1 177 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CSPG4P5Q96PW8 444 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CCNL2Q96S94 520 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AGAP2Q99490 1192 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BARD1Q99728 777 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PIP5K1AQ99755 562 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DPYSL5Q9BPU6 564 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FAM118BQ9BPY3 351 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMEM246Q9BRR3 403 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TTYH2Q9BSA4 534 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MCMBPQ9BTE3 642 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CCDC32Q9BV29 185 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TLR10Q9BXR5 811 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ANKRD60Q9BZ19 345 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GCOM2Q9BZD3 368 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF552Q9H707 407 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MINDY3Q9H8M7 445 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SIAEQ9HAT2 523 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GKN1Q9NS71 199 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 OLA1Q9NTK5 396 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 UCKL1Q9NWZ5 548 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NKIRAS2Q9NYR9 191 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BFARQ9NZS9 450 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MPP6Q9NZW5 540 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 WHRNQ9P202 907 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ZSWIM5Q9P217 1185 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TXNDC16Q9P2K2 825 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PI4KBQ9UBF8 816 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ABCD2Q9UBJ2 740 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DNAJB9Q9UBS3 223 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NDRG3Q9UGV2 375 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SRP68Q9UHB9 627 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PCYOX1Q9UHG3 505 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CYB5R1Q9UHQ9 305 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ENOPH1Q9UHY7 261 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TAGLN3Q9UI15 199 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TINAGQ9UJW2 476 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF229Q9UJW7 825 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 POU2F3Q9UKI9 436 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BAIAP2Q9UQB8 552 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KLHL20Q9Y2M5 609 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMX2Q9Y320 296 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NUBP2Q9Y5Y2 271 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 COPG1Q9Y678 874 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AP4B1Q9Y6B7 739 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CDY2AQ9Y6F7 541 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CACNA1FO60840 1977 aa3.59□□□□□ -1.83
XRCC4-203ENST00000396027 ARAP3Q8WWN8 1544 aa3.59□□□□□ -1.83
XRCC4-203ENST00000396027 RIC1Q4ADV7 1423 aa3.59□□□□□ -1.83
XRCC4-203ENST00000396027 PALLDQ8WX93 1383 aa3.59□□□□□ -1.83
XRCC4-203ENST00000396027 IQGAP1P46940 1657 aa3.59□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.59□□□□□ -1.84
XRCC4-203ENST00000396027 FAM92AA1XBS5 289 aa3.59□□□□□ -1.84
XRCC4-203ENST00000396027 CCDC78A2IDD5 438 aa3.59□□□□□ -1.84
XRCC4-203ENST00000396027 PCP4L1A6NKN8 68 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms