RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TFDP2Q14188 446 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 CNGA3Q16281 694 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 MAP9Q49MG5 647 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 MANEAQ5SRI9 462 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 PHF19Q5T6S3 580 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 BZW1Q7L1Q6 419 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 PIM3Q86V86 326 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 ZFAND4Q86XD8 727 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 NRROSQ86YC3 692 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 KATNAL2Q8IYT4 538 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 SYCE1Q8N0S2 351 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 PQLC3Q8N755 202 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 ZDHHC1Q8WTX9 485 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 RBM41Q96IZ5 413 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 TSGA13Q96PP4 275 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 GSDMCQ9BYG8 508 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 FRMD8Q9BZ67 464 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 LACRTQ9GZZ8 138 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 CARS2Q9HA77 564 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 STARD5Q9NSY2 213 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 SPATS2LQ9NUQ6 558 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 AKAP7Q9P0M2 348 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 MOSPD1Q9UJG1 213 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 PCDHB11Q9Y5F2 797 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 PCDHGA4Q9Y5G9 962 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 TENM4Q6N022 2769 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 C3orf70A6NLC5 250 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 PSMD11O00231 422 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 HGSO14964 777 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 MATN3O15232 486 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 ZW10O43264 779 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 HEXIM1O94992 359 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 FUCA1P04066 466 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 SFTPCP11686 197 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 NFKBIAP25963 317 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 VIPR1P32241 457 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 MMP13P45452 471 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 MAZP56270 477 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 ILF3Q12906 894 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 NFATC3Q12968 1075 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 C16orf72Q14CZ0 275 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 RALGPS1Q5JS13 557 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 TMEM164Q5U3C3 297 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 SLC9A4Q6AI14 798 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 CCNYQ8ND76 341 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 EXTL1Q92935 676 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 FATE1Q969F0 183 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 DTD2Q96FN9 168 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 NUDCD1Q96RS6 583 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 ARHGAP9Q9BRR9 750 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 TSGA10Q9BZW7 698 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 RDH14Q9HBH5 336 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 TAAR2Q9P1P5 351 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 AMACRQ9UHK6 382 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 PHTF1Q9UMS5 762 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 PCDHGC4Q9Y5F7 938 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 DUSP10Q9Y6W6 482 aa17.49■□□□□ 0.39
SHKBP1-203ENST00000594298 CCDC66A2RUB6 948 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 RHPN2P1A8MT19 583 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 CPP00450 1065 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 KRT10P13645 584 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 LHCGRP22888 699 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 CES1P23141 567 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 CETN2P41208 172 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 GPR3P46089 330 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 MAPK10P53779 464 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 CDK3Q00526 305 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 PEX6Q13608 980 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 PDK1Q15118 436 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 MFSD7Q6UXD7 560 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 PRICKLE2Q7Z3G6 844 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 PGBD5Q8N414 524 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 ZSCAN1Q8NBB4 408 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 EXD1Q8NHP7 514 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 UBE2Q2Q8WVN8 375 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 SEMA3CQ99985 751 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 MGME1Q9BQP7 344 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 DESI2Q9BSY9 194 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 FAM117AQ9C073 453 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 DTLQ9NZJ0 730 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 SLC17A4Q9Y2C5 497 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 HEY1Q9Y5J3 304 aa17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 HEMK1Q9Y5R4 338 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-203ENST00000594298 TTC24A2A3L6 582 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 PYCARD-AS1I3L0S3 204 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 ECEL1O95672 775 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 IVLP07476 585 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 CYP2A6P11509 494 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 ITGB6P18564 788 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 CD1CP29017 333 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 NR2C2P49116 596 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 OR1D5P58170 312 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 GBE1Q04446 702 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 SQSTM1Q13501 440 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 TRA2AQ13595 282 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 AMZ1Q400G9 498 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 TFDP3Q5H9I0 405 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms