RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 GKN2Q86XP6 184 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 MARCH9Q86YJ5 346 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SLC13A5Q86YT5 568 aaPredicted RBP11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SLC35F3Q8IY50 421 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 RAVER1Q8IY67 606 aaKnown RBP11.76□□□□□ -0.53
RAB5C-204ENST00000547517 KYQ8NBH2 561 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 CCL4L1Q8NHW4 92 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 BLOC1S5Q8TDH9 187 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 HIC2Q96JB3 615 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 TMEM121Q9BTD3 319 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SPATA16Q9BXB7 569 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 CARD9Q9H257 536 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 BPIFA1Q9NP55 256 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 NCKIPSDQ9NZQ3 722 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SUFUQ9UMX1 484 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 GPR34Q9UPC5 381 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SLC17A4Q9Y2C5 497 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 CPED1A4D0V7 1026 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 RGSL1A5PLK6 1076 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 C5orf60A6NFR6 353 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 C1QTNF9BB2RNN3 333 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 B4DGG1 531 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 LIASO43766 372 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 ASMTLO95671 621 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 AGTP01019 485 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 EPOP01588 193 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 ATP1A1P05023 1023 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 IVLP07476 585 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 C1QTNF9P0C862 333 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 BPIP17213 487 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 RPIAP49247 311 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 DUSP3P51452 185 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 DCDC1P59894 354 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 UNQ6494/PRO21346Q6UXR6 183 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 TMPRSS7Q7RTY8 843 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 EFL1Q7Z2Z2 1120 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 NLRP8Q86W28 1048 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 GALNT15Q8N3T1 639 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 TAB3Q8N5C8 712 aaPredicted RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 ARL10Q8N8L6 244 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 GPR26Q8NDV2 337 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 IFI44Q8TCB0 444 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 UBE2Q2Q8WVN8 375 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 C1orf54Q8WWF1 131 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 GLMNQ92990 594 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 COX14Q96I36 57 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 OR2M4Q96R27 311 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 SRPK1Q96SB4 655 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 RAD18Q9NS91 495 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 GULP1Q9UBP9 304 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 AAR2Q9Y312 384 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 MSRB2Q9Y3D2 182 aa11.75□□□□□ -0.53
RAB5C-204ENST00000547517 OAS3Q9Y6K5 1087 aaKnown RBP11.75□□□□□ -0.53
RAB5C-204ENST00000547517 BUD23O43709 281 aaKnown RBP11.74□□□□□ -0.53
RAB5C-204ENST00000547517 USP12O75317 370 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 FUCA1P04066 466 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 CDK4P11802 303 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 CXCR5P32302 372 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 ADRA1AP35348 466 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
RAB5C-204ENST00000547517 ILF3Q12906 894 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■□□□□ 11.1
RAB5C-204ENST00000547517 SNX1Q13596 522 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 SPARCL1Q14515 664 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 SDR16C5Q8N3Y7 309 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 TTC30BQ8N4P2 665 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 TRAM1L1Q8N609 369 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 GATA6Q92908 595 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 PPP1R2P1Q96PQ5 205 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 TBL1YQ9BQ87 522 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 ZSCAN5AQ9BUG6 496 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
RAB5C-204ENST00000547517 TLR10Q9BXR5 811 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 GSDMCQ9BYG8 508 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 CDH19Q9H159 772 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 TRABDQ9H4I3 376 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 ARFGAP3Q9NP61 516 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 HACD3Q9P035 362 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 NFKBIL1Q9UBC1 381 aaPredicted RBP11.74□□□□□ -0.53
RAB5C-204ENST00000547517 CNOT6Q9ULM6 557 aaKnown RBP11.74□□□□□ -0.53
RAB5C-204ENST00000547517 GPSM3Q9Y4H4 160 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 PTPRBP23467 1997 aa11.74□□□□□ -0.53
RAB5C-204ENST00000547517 CEP104O60308 925 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 METTL18O95568 372 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 IFNB1P01574 187 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 FGGP02679 453 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 GP1BAP07359 652 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 JUPP14923 745 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 AK4P27144 223 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 HMGCLP35914 325 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms