RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 RPS27LQ71UM5 84 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 CRIPAKQ8N1N5 446 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 OR13C4Q8NGS5 318 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 AUTS2Q8WXX7 1259 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 WBP2Q969T9 261 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 GPR78Q96P69 363 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 CFHR5Q9BXR6 569 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 CCDC68Q9H2F9 335 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP35-207ENST00000530546 MTRRQ9UBK8 725 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 STK39Q9UEW8 545 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 ZDHHC2Q9UIJ5 367 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 ARHGAP26Q9UNA1 814 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SCN5AQ14524 2016 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 PLXNA3P51805 1871 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 H6PDO95479 791 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 EIF2S1P05198 315 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 CDH3P22223 829 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 RGRP47804 291 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 TUFMP49411 452 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 CSRP3P50461 194 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 TLE2Q04725 743 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 DEPDC1Q5TB30 811 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 HECTD2Q5U5R9 776 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 EPGNQ6UW88 154 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 NANOGNBQ7Z5D8 188 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 PIM3Q86V86 326 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 CALML6Q8TD86 181 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SH3RF2Q8TEC5 729 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 CHPT1Q8WUD6 406 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 BHMTQ93088 406 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 EME1Q96AY2 570 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SERPINI1Q99574 410 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 GPATCH1Q9BRR8 931 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 DRC3Q9H069 523 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 MRPL46Q9H2W6 279 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 PRPF19Q9UMS4 504 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 FNDC3AQ9Y2H6 1198 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 TMEM233B4DJY2 109 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CBX4O00257 560 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 ZBTB14O43829 449 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 BMP10O95393 424 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 PRSS56P0CW18 603 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 HNRNPLP14866 589 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP35-207ENST00000530546 CA8P35219 290 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 TXNL4AP83876 142 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 POU4F1Q01851 419 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 ARHGEF6Q15052 776 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 SLC8B1Q6J4K2 584 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 ISLR2Q6UXK2 745 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 RYBPQ8N488 228 aaPredicted RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 TXNDC5Q8NBS9 432 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 RDH11Q8TC12 318 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 HM13Q8TCT9 377 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 C2orf15Q8WU43 125 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 EXT2Q93063 718 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 MARK4Q96L34 752 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CLSTN3Q9BQT9 956 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 POMKQ9H5K3 350 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 TCF7L2Q9NQB0 619 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 GTSE1Q9NYZ3 720 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 TRPM5Q9NZQ8 1165 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 RAP2CQ9Y3L5 183 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 DOCK4Q8N1I0 1966 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 LOC285095A0A1B0GVY8 99 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 LDB2O43679 373 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 H2AFYO75367 372 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 RHOCP08134 193 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 SERPINF2P08697 491 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CD1EP15812 388 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 HOXD9P28356 352 aaPredicted RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 SERPINB5P36952 375 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 RXRGP48443 463 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 RPL14P50914 215 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 TRIM60Q495X7 471 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 FAM219BQ5XKK7 198 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 SEL1L3Q68CR1 1132 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CILP2Q8IUL8 1156 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 ARL10Q8N8L6 244 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 ANKRD49Q8WVL7 239 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 DLG3Q92796 817 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 RMDN1Q96DB5 314 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 PHF21BQ96EK2 531 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 IGSF21Q96ID5 467 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CYP2S1Q96SQ9 504 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 TTLL2Q9BWV7 592 aa11.53□□□□□ -0.56
USP35-207ENST00000530546 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 UBA2Q9UBT2 640 aaPredicted RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 HEMK1Q9Y5R4 338 aaPredicted RBP11.53□□□□□ -0.56
USP35-207ENST00000530546 A0A087X1B8 175 aa11.52□□□□□ -0.56
USP35-207ENST00000530546 TARM1B6A8C7 271 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms