RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 MYCBPAPQ8TBZ2 947 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 SPATA18Q8TC71 538 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 BCAS4Q8TDM0 211 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 DNAJB3Q8WWF6 145 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 RXFP2Q8WXD0 754 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 ATG4AQ8WYN0 398 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 RAPGEF5Q92565 580 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 CENPIQ92674 756 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 TNIP3Q96KP6 325 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 HSFY1Q96LI6 401 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 FCRL4Q96PJ5 515 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 CCDC77Q9BR77 488 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 MRPL45Q9BRJ2 306 aaKnown RBP4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 SEMA4CQ9C0C4 833 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 FAM49AQ9H0Q0 323 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 C11orf54Q9H0W9 315 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 CENPHQ9H3R5 247 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 CCDC134Q9H6E4 229 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 PCDH9Q9HC56 1237 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC38A7Q9NVC3 462 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 BCCIPQ9P287 314 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 FETUBQ9UGM5 382 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 HMGXB4Q9UGU5 601 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 LGALS13Q9UHV8 139 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 DNPEPQ9ULA0 475 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 SHOC2Q9UQ13 582 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 CDYLQ9Y232 598 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 PIN4Q9Y237 131 aaKnown RBP4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 TRPV2Q9Y5S1 764 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 SNX9Q9Y5X1 595 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 UTRNP46939 3433 aa4.5□□□□□ -1.69
UBE2D3-230ENST00000510599 MYO18AQ92614 2054 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 VWA8A3KMH1 1905 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 A0A087WUV0 522 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CFAP69A5D8W1 941 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 GMNCA6NCL1 334 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 A8MXQ7 604 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 E5RJQ4 531 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 E7ESA3 106 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 PI4K2BG5E9Z4 385 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 M0QZ92 97 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SGK1O00141 431 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 EBAG9O00559 213 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 GABRDO14764 452 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 XPO1O14980 1071 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 ALOX15BO15296 676 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CA12O43570 354 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 TRAPPC3O43617 180 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 PRPSAP2O60256 369 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CST8O60676 142 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 HUS1O60921 280 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CDH16O75309 829 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 ZNF189O75820 626 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 FAM107AO95990 144 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SHBGP04278 402 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 ELFN1P0C7U0 828 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 PRR35P0CG20 571 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 MYCLP1P12525 358 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 PDGFRAP16234 1089 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 ZFXP17010 805 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 TGM2P21980 687 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 GATA3P23771 443 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SDC4P31431 198 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 RPL9P32969 192 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CHKAP35790 457 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 MAGEA4P43358 317 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC18A1P54219 525 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 BCAT1P54687 386 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 LILRA4P59901 499 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 MAGOHP61326 146 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 MRPS6P82932 125 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 BEX3Q00994 111 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SRSF2Q01130 221 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 OTUD4Q01804 1114 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 XRCC4Q13426 336 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 DPYSL3Q14195 570 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CCL14Q16627 93 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 KYNUQ16719 465 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CCDC14Q49A88 953 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 DNAJC21Q5F1R6 531 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 EFHC1Q5JVL4 640 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 ERMARDQ5T6L9 678 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 RNASEH2BQ5TBB1 312 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 MFSD14CQ5VZR4 134 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC9A4Q6AI14 798 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 C11orf87Q6NUJ2 197 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 PMF1Q6P1K2 205 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 FAM43BQ6ZT52 329 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 CENPUQ71F23 418 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC26A9Q7LBE3 791 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 STRADAQ7RTN6 431 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 MRPL10Q7Z7H8 261 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 ACOT1Q86TX2 421 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 SERINC5Q86VE9 423 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 NLRP14Q86W24 1093 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 FAM228AQ86W67 206 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 TTC30AQ86WT1 665 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 TDRPQ86YL5 185 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 RFX6Q8HWS3 928 aa4.49□□□□□ -1.69
UBE2D3-230ENST00000510599 TMEM86AQ8N2M4 240 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms