RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 PANX2Q96RD6 677 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 YIPF2Q9BWQ6 316 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 SIK2Q9H0K1 926 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 RAB6CQ9H0N0 254 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 PCED1AQ9H1Q7 454 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 ZMAT3Q9HA38 289 aaKnown RBP4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 POLR3BQ9NW08 1133 aaPredicted RBP4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 TMEM248Q9NWD8 314 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 UVRAGQ9P2Y5 699 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 OR12D3Q9UGF7 316 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 ZC3H7BQ9UGR2 993 aaKnown RBP4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 SUN2Q9UH99 717 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 SCOCQ9UIL1 159 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 RAB23Q9ULC3 237 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 FZD10Q9ULW2 581 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 SCML1Q9UN30 329 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 PLA2G4CQ9UP65 541 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 ERVW-1Q9UQF0 538 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 HS3ST2Q9Y278 367 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 PCDHGA5Q9Y5G8 931 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 GPR179Q6PRD1 2367 aa4.72□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 MYO18AQ92614 2054 aaKnown RBP4.71□□□□□ -1.65
RNU6ATAC28P-201ENST00000459249 IGHV1OR15-9A0A0B4J2B8 117 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ZSCAN5CA6NGD5 496 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 A6NLC8 198 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 C10orf142B7Z368 130 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 WASH3PC4AMC7 463 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 FAM72CH0Y354 149 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 KRIT1O00522 736 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 KCNK3O14649 394 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ALOX15BO15296 676 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 SGTAO43765 313 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 AKR1B10O60218 316 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 PRPSAP2O60256 369 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 LRCH4O75427 683 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ZMPSTE24O75844 475 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 CNTN5O94779 1100 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 RHOBTB1O94844 696 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 EPN2O95208 641 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 LCA5LO95447 670 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 LPLP06858 475 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 H2AFZP0C0S5 128 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 COL6A2P12110 1019 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 CKMT1AP12532 417 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 MIPP30301 263 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 OXTRP30559 389 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 NNMTP40261 264 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 PXNP49023 591 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 MAN2A2P49641 1150 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 COPAP53621 1224 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ITGA8P53708 1063 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 HADHBP55084 474 aaKnown RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 LGALS4P56470 323 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 YBEYP58557 167 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ST8SIA6P61647 398 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 VAMP2P63027 116 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 KRT83P78385 493 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 SLC25A11Q02978 314 aaKnown RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 GNA12Q03113 381 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 GFPT1Q06210 699 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 SLC20A2Q08357 652 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 SPIDRQ14159 915 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ELAVL3Q14576 367 aaKnown RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 DPYSL2Q16555 572 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 C3orf36Q3SXR2 165 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 PARP15Q460N3 678 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 PLK5Q496M5 336 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 TTC31Q49AM3 519 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 BOLA3Q53S33 107 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ERMARDQ5T6L9 678 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 FAM72AQ5TYM5 149 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ZNF776Q68DI1 518 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 FAM72DQ6L9T8 149 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 RNF111Q6ZNA4 994 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ACAD11Q709F0 780 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 CHSY3Q70JA7 882 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 H2AFVQ71UI9 128 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 TFAP2DQ7Z6R9 452 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 KBTBD6Q86V97 674 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 LRRTM4Q86VH4 590 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 FAM72BQ86X60 149 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 CPNE8Q86YQ8 564 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 TMPRSS6Q8IU80 811 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 RHOT2Q8IXI1 618 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 CCDC170Q8IYT3 715 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 APCDD1Q8J025 514 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 UMODL1-AS1Q8N2C9 162 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 OXR1Q8N573 874 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 SH2D3CQ8N5H7 860 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 RTL3Q8N8U3 475 aaKnown RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 OR52K2Q8NGK3 314 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 OR14C36Q8NHC7 312 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 GIMAP7Q8NHV1 300 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 ZNF564Q8TBZ8 553 aaPredicted RBP4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 FAM71BQ8TC56 605 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 HMGB4Q8WW32 186 aa4.71□□□□□ -1.66
RNU6ATAC28P-201ENST00000459249 CASKIN2Q8WXE0 1202 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms