RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 EIF2B3Q9NR50 452 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 PCDHA12Q9UN75 941 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MTMR6Q9Y217 621 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 FRMD4BQ9Y2L6 1034 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 LYVE1Q9Y5Y7 322 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CAPN7Q9Y6W3 813 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM169AQ9Y6X4 670 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MYH8P13535 1937 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 ABCC3O15438 1527 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MRC2Q9UBG0 1479 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 LAMA4Q16363 1823 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MYO5BQ9ULV0 1848 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 KIAA0232Q92628 1395 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZNF804BA4D1E1 1349 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 SOS1Q07889 1333 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PIK3C2BO00750 1634 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MROH1Q8NDA8 1641 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 A0A1W2PPC1 479 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TYW5A2RUC4 315 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 USP17L23D6RBM5 183 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 STMND1H3BQB6 276 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 H3BQF6 201 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 H3BQV1 296 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 K7ENM7 598 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 GTPBP1O00178 669 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 LIN7AO14910 233 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 AP5Z1O43299 807 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PAGE4O60829 102 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MLYCDO95822 493 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MT-CYBP00156 380 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 IFNA2P01563 188 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TFP02787 698 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 KLKB1P03952 638 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TOP1P11387 765 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 SRD5A1P18405 259 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CDH2P19022 906 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 EDN2P20800 178 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MAPK4P31152 587 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 AVPR1AP37288 418 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 ALDH7A1P49419 539 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMPRSS3P57727 454 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 NANOS3P60323 173 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 GNG11P61952 73 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 SSBP2P81877 361 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 SRSF1Q07955 248 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 GOLGA8DPQ0D2H9 430 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CASP8Q14790 479 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CAMK4Q16566 473 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MEA1Q16626 185 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 DPCR1Q3MIW9 517 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PLEKHO1Q53GL0 409 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MTX3Q5HYI7 312 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM205BPQ63HN1 556 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 HEPHL1Q6MZM0 1159 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMEM71Q6P5X7 295 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 LRRC31Q6UY01 552 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 GPSM1Q86YR5 675 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 DENND6AQ8IWF6 608 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC83Q8IWF9 413 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PDILTQ8N807 584 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMEM116Q8NCL8 245 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CEP76Q8TAP6 659 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MAGEC3Q8TD91 643 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 NTN5Q8WTR8 489 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC12Q8WUD4 166 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMEM174Q8WUU8 243 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 ARHGEF2Q92974 986 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PERPQ96FX8 193 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 ANKRD27Q96NW4 1050 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 BBS4Q96RK4 519 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 BAG1Q99933 345 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 JPH2Q9BR39 696 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 STRA6Q9BX79 667 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PARD6BQ9BYG5 372 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 NUF2Q9BZD4 464 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 TM6SF1Q9BZW5 370 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PLEKHA4Q9H4M7 779 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 KLHL31Q9H511 634 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MVB12BQ9H7P6 319 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 MAP6D1Q9H9H5 199 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 HCFC1R1Q9NWW0 138 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 NSMCE4AQ9NXX6 385 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 EHD2Q9NZN4 543 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTNNAL1Q9UBT7 734 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 NRBP1Q9UHY1 535 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 SLCO3A1Q9UIG8 710 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 HOOK1Q9UJC3 728 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 HAO1Q9UJM8 370 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 GGA2Q9UJY4 613 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 INTS6Q9UL03 887 aaKnown RBP4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM96BQ9Y3D0 163 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 ECM29Q5VYK3 1845 aa4.55□□□□□ -1.68
HMGB1P16-201ENST00000447155 PIK3C2AO00443 1686 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 A0A1W2PRG0 241 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTAGE9A4FU28 777 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 LIPT2A6NK58 231 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 KLRF2D3W0D1 207 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms