RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SH3BP1Q9Y3L3 701 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PKP3Q9Y446 797 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ZNF711Q9Y462 761 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 CPQQ9Y646 472 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 COMMD10Q9Y6G5 202 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 SLC30A1Q9Y6M5 507 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 SCN8AQ9UQD0 1980 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ABHD14A-ACY1A0A1B0GW23 586 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 CCDC189A1A4V9 331 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 EIF4E1BA6NMX2 242 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 E5RI56 91 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 H3BMM5 538 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 UBFD1O14562 309 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 MRASO14807 208 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 SCAMP3O14828 347 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ECI2O75521 394 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 SNRPB2P08579 225 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 CD1EP15812 388 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 THOP1P52888 689 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 CDH13P55290 713 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PSME3P61289 254 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 AP1S1P61966 158 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 CREMQ03060 361 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 CACNG1Q06432 222 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 CDC16Q13042 620 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PTK2BQ14289 1009 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PPP1R3AQ16821 1122 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ZNF423Q2M1K9 1284 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 KIF19Q2TAC6 998 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PIGGQ5H8A4 983 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ATXN7L2Q5T6C5 722 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ARMC12Q5T9G4 340 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 KANK2Q63ZY3 851 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PSAPL1Q6NUJ1 521 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ZFP1Q6P2D0 407 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 TXNDC11Q6PKC3 985 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 EFL1Q7Z2Z2 1120 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 DDIASQ8IXT1 998 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 KBTBD2Q8IY47 623 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 STK40Q8N2I9 435 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ARL14EPQ8N8R7 260 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 TTC16Q8NEE8 873 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 GDPD5Q8WTR4 605 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 TWIST2Q8WVJ9 160 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 AUTS2Q8WXX7 1259 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 MRPS31Q92665 395 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 SMIM14Q96QK8 99 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 SLC25A23Q9BV35 468 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 KLHL4Q9C0H6 718 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 SAGE1Q9NXZ1 904 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 ADA2Q9NZK5 511 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 VPS51Q9UID3 782 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 MAFFQ9ULX9 164 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 PSMD13Q9UNM6 376 aa10.38□□□□□ -0.75
CPNE1-218ENST00000439806 OAS3Q9Y6K5 1087 aaKnown RBP10.38□□□□□ -0.75
CPNE1-218ENST00000439806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 MAGEA13PA6NCF6 341 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 LRRC14BA6NHZ5 514 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 STX16-NPEPL1H3BU86 382 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 H7C0S8 307 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CDC7O00311 574 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 BTN3A1O00481 513 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 STX16O14662 325 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 GIPC1O14908 333 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 SNX2O60749 519 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CLASP2O75122 1294 aaKnown RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 NIPSNAP2O75323 286 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 VPS4BO75351 444 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 SMNDC1O75940 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CDK14O94921 469 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 SIX3O95343 332 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 STAMBPO95630 424 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CD160O95971 181 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 MT-CO1P00395 513 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 LRG1P02750 347 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 S100BP04271 92 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 FGF4P08620 206 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 MTHFD2P13995 350 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CTPS1P17812 591 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 XRCC1P18887 633 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 HDCP19113 662 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CHRM3P20309 590 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CDKN1CP49918 316 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CLCN4P51793 760 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 XIAPP98170 497 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CYP4F8P98187 520 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CLCQ05315 142 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 CEACAM7Q14002 265 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 TSNQ15631 228 aaKnown RBP10.37□□□□□ -0.75
CPNE1-218ENST00000439806 TRIP10Q15642 601 aa10.37□□□□□ -0.75
CPNE1-218ENST00000439806 RBBP7Q16576 425 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms