RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 NPAS2Q99743 824 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 AARSD1Q9BTE6 412 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 SPATA16Q9BXB7 569 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 ZBTB26Q9HCK0 441 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 GIMAP2Q9UG22 337 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 CSPG5O95196 566 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 PMLP29590 882 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 MTTPP55157 894 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 PKNOX1P55347 436 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 MAP7Q14244 749 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 C6orf163Q5TEZ5 329 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 PAQR3Q6TCH7 311 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 CHST9Q7L1S5 443 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 DSELQ8IZU8 1212 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 BBS5Q8N3I7 341 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 SLC26A7Q8TE54 656 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 USP13Q92995 863 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 C3orf30Q96M34 536 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 NR1H4Q96RI1 486 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 FBRSL1Q9HCM7 1045 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 LHX3Q9UBR4 397 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 KIAA1671Q9BY89 1806 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 RGSL1A5PLK6 1076 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 OGNP20774 298 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 SUOXP51687 545 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 HK2P52789 917 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 THOP1P52888 689 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 FOXA1P55317 472 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 CYP4F8P98187 520 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 IKBKEQ14164 716 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 BTG3Q14201 252 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 FBXW8Q8N3Y1 598 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 GABPB2Q8TAK5 448 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 GATA6Q92908 595 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 TMEM169Q96HH4 297 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 KCNA7Q96RP8 456 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 RMI1Q9H9A7 625 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 ATP11BQ9Y2G3 1177 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 SLCO1B7G3V0H7 640 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 ENO3P13929 434 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 ATXN3P54252 364 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 LSAMPQ13449 338 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 CYLC2Q14093 348 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 PFKFB4Q16877 469 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 SETD3Q86TU7 594 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 OR9I1Q8NGQ6 314 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 EID2BQ96D98 161 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 TRMT2BQ96GJ1 504 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 HIC2Q96JB3 615 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 SLC45A3Q96JT2 553 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 ATOH8Q96SQ7 321 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 TM6SF2Q9BZW4 377 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 S100A14Q9HCY8 104 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 PLK2Q9NYY3 685 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 TBX21Q9UL17 535 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 INSL5Q9Y5Q6 135 aa15.13■□□□□ 0.01
SCAMP4-202ENST00000409472 H0Y626 953 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 NIPSNAP2O75323 286 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 RHOBTB1O94844 696 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CRTAMO95727 393 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 THRAP10827 490 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 IMPDH1P20839 514 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CA5AP35218 305 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CSKP41240 450 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 SH3BP2P78314 561 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 PDAP1Q13442 181 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 TAF1AQ15573 450 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 PEX13Q92968 403 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 BIRC8Q96P09 236 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 GPR21Q99679 349 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 MEAF6Q9HAF1 191 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 IL21Q9HBE4 155 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 NDE1Q9NXR1 346 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 VPS28Q9UK41 221 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 C5orf42Q9H799 3197 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CDC7O00311 574 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CFLARO15519 480 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 ALPIP09923 528 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CTPS1P17812 591 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 GKP32189 559 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 MC4RP32245 332 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 HERVK_113P63132 956 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CEACAM7Q14002 265 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 LRRC36Q1X8D7 754 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 AFTPHQ6ULP2 937 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 RP9Q8TA86 221 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 TOP1MTQ969P6 601 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 ZNF689Q96CS4 500 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 L3HYPDHQ96EM0 354 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 ZNF558Q96NG5 402 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 ERVK-6Q9BXR3 956 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 VPS51Q9UID3 782 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 TSR3Q9UJK0 312 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 ADAMTS6Q9UKP5 1117 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 TRAF6Q9Y4K3 522 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 CPQQ9Y646 472 aa15.12■□□□□ 0.01
SCAMP4-202ENST00000409472 PTPRSQ13332 1948 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms