RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ZNF792Q3KQV3 632 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 LRTOMTQ8WZ04 291 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.62■□□□□ 0.41
SNED1-204ENST00000401884 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 SLC28A1O00337 649 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 DLGAP3O95886 979 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 CYP2A6P11509 494 aaPredicted RBP17.62■□□□□ 0.41
SNED1-204ENST00000401884 CXCR3P49682 368 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 MLLT6P55198 1093 aaPredicted RBP17.62■□□□□ 0.41
SNED1-204ENST00000401884 GALNT2Q10471 571 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 TP53BP2Q13625 1128 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 TRIP4Q15650 581 aaPredicted RBP17.62■□□□□ 0.41
SNED1-204ENST00000401884 TRAPPC5Q8IUR0 188 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 TSSK3Q96PN8 268 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 SPG21Q9NZD8 308 aa17.62■□□□□ 0.41
SNED1-204ENST00000401884 C9IYK1 514 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 SNAI1O95863 264 aaPredicted RBP17.61■□□□□ 0.41
SNED1-204ENST00000401884 ALDOAP04075 364 aaKnown RBP17.61■□□□□ 0.41
SNED1-204ENST00000401884 ST13P50502 369 aaKnown RBP17.61■□□□□ 0.41
SNED1-204ENST00000401884 POLR2JP52435 117 aaKnown RBP17.61■□□□□ 0.41
SNED1-204ENST00000401884 GJA9P57773 515 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 PLD6Q8N2A8 252 aaKnown RBP17.61■□□□□ 0.41
SNED1-204ENST00000401884 TMEM39AQ9NV64 488 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 COL18A1P39060 1754 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 TMEM233B4DJY2 109 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 GSTM1P09488 218 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 IDH2P48735 452 aaKnown RBP17.61■□□□□ 0.41
SNED1-204ENST00000401884 C1orf21Q9H246 121 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 SLC2A6Q9UGQ3 507 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 ZDHHC2Q9UIJ5 367 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 LINC00854A0A1B0GVQ3 168 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 LIPEQ05469 1076 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 PLCL1Q15111 1095 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 KCTD21Q4G0X4 260 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 IL23RQ5VWK5 629 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 ABCG8Q9H221 673 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 MAGEL2Q9UJ55 1249 aa17.61■□□□□ 0.41
SNED1-204ENST00000401884 LRATO95237 230 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 SLC25A14O95258 325 aaPredicted RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 MAPKAPK2P49137 400 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 ADGRE1Q14246 886 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 CERS6Q6ZMG9 384 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 CCDC103Q8IW40 242 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 TMEM130Q8N3G9 435 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 CLHC1Q8NHS4 586 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 FUBP3Q96I24 572 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNED1-204ENST00000401884 B3GALT6Q96L58 329 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 CRTAC1Q9NQ79 661 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 DUSP12Q9UNI6 340 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 TJP1Q07157 1748 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 MYO5AQ9Y4I1 1855 aaKnown RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 LTBP3Q9NS15 1303 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 RFXANKO14593 260 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 GNPDA1P46926 289 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 SETMARQ53H47 684 aaPredicted RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 STARD8Q92502 1023 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 PANX1Q96RD7 426 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 IPPKQ9H8X2 491 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 DMTF1Q9Y222 760 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 ANKRD12Q6UB98 2062 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 CCDC162PA2VCL2 907 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 STX16-NPEPL1H3BU86 382 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 IFRD1O00458 451 aaPredicted RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 SEPT4O43236 478 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 ANXA11P50995 505 aaKnown RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 GSCP56915 257 aaPredicted RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 OR13C4Q8NGS5 318 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 U3KQV3 271 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 SLC22A2O15244 555 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 INSIG1O15503 277 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 SIX3O95343 332 aaPredicted RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 FGF3P11487 239 aaPredicted RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 CPNE9Q8IYJ1 553 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 PCDHB1Q9Y5F3 818 aa17.6■□□□□ 0.41
SNED1-204ENST00000401884 COPG1Q9Y678 874 aaKnown RBP17.6■□□□□ 0.41
SNED1-204ENST00000401884 MYO9BQ13459 2157 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 A0A1B0GVM2 712 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 TCAF2A6NFQ2 919 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 OR4F21O95013 312 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 GRK3P35626 688 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 FUT10Q6P4F1 479 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 CYP4Z1Q86W10 505 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 PROSER1Q86XN7 944 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 MYO19Q96H55 970 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 OSBPL6Q9BZF3 934 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 EVLQ9UI08 416 aaPredicted RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 CCDC189A1A4V9 331 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ARHGEF9O43307 516 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 POLR2EP19388 210 aaKnown RBP17.59■□□□□ 0.41
SNED1-204ENST00000401884 TMEM63BQ5T3F8 832 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ALG2Q9H553 416 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 PCDH12Q9NPG4 1184 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 MOCS1Q9NZB8 636 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 ADGRE2Q9UHX3 823 aa17.59■□□□□ 0.41
SNED1-204ENST00000401884 FKBPLQ9UIM3 349 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms