RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LYPLAL1Q5VWZ2 237 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 LYSMD3Q7Z3D4 306 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 WDR70Q9NW82 654 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 DUS2Q9NX74 493 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 CORO1CQ9ULV4 474 aaPredicted RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 HHLA1C9JL84 531 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 NIPSNAP2O75323 286 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 SNRPB2P08579 225 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 PCNAP12004 261 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 GLDCP23378 1020 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 GPR1P46091 355 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 IRF8Q02556 426 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 CPSF6Q16630 551 aaKnown RBP eCLIP13.98□□□□□ -0.172e-9■■■■■ 44.3
SCAF4-202ENST00000399804 RAET1GQ6H3X3 334 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 TMEM173Q86WV6 379 aaPredicted RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 RP9Q8TA86 221 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 MIEF2Q96C03 454 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 CLPTM1LQ96KA5 538 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 LENG8Q96PV6 779 aaPredicted RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 PRPF18Q99633 342 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 ING2Q9H160 280 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 TDP1Q9NUW8 608 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 OSER1Q9NX31 292 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 VPS51Q9UID3 782 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 DTNAQ9Y4J8 743 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 DLX3O60479 287 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 VPS4BO75351 444 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 SNUPNO95149 360 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 PABPC1P11940 636 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 FAM189BP81408 668 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 ABRQ12979 859 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 SGCGQ13326 291 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 MBTPS1Q14703 1052 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 CYTH1Q15438 398 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 PGS1Q32NB8 556 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 TMEM259Q4ZIN3 620 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 STEAP4Q687X5 459 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 ARHGAP12Q8IWW6 846 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 SIDT2Q8NBJ9 832 aaKnown RBP13.98□□□□□ -0.17
SCAF4-202ENST00000399804 SELENOMQ8WWX9 145 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 MCM8Q9UJA3 840 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 ZNF711Q9Y462 761 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 GNG14A0A1W2PPG7 69 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 KLF11O14901 512 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 ULK1O75385 1050 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PSMG1O95456 288 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 MSX2P35548 267 aaPredicted RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PTGER3P43115 390 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 MAGEA6P43360 314 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 HK2P52789 917 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 ESRRGP62508 458 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 KRT72Q14CN4 511 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 LSM12Q3MHD2 195 aaKnown RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 TXNDC11Q6PKC3 985 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 ST13P5Q8NFI4 369 aaPredicted RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PPP1R16AQ96I34 528 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 C1orf50Q9BV19 199 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 TAS2R1Q9NYW7 299 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 DYRK1BQ9Y463 629 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 CEP290O15078 2479 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 CCDC154A6NI56 674 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 ENO4A6NNW6 628 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 ESR1P03372 595 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 CNPP09543 421 aaKnown RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 UBTFL6P0CB48 400 aaPredicted RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 GKP32189 559 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PHEXP78562 749 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 RAB33AQ14088 237 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 TEAD2Q15562 447 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 IZUMO2Q6UXV1 221 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 CILP2Q8IUL8 1156 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 BBS7Q8IWZ6 715 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 SCML4Q8N228 414 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 FAM83DQ9H4H8 585 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 ANLNQ9NQW6 1124 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 SIRPGQ9P1W8 387 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PDZK1P1A8MUH7 402 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 MAGEC1O60732 1142 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PIK3CGP48736 1102 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 MRPS22P82650 360 aaKnown RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 SQLEQ14534 574 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 RANBP10Q6VN20 620 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 CYP4V2Q6ZWL3 525 aaPredicted RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 GRASPQ7Z6J2 395 aaPredicted RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 CMTR2Q8IYT2 770 aaKnown RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 PNPLA1Q8N8W4 532 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 FAM162AQ96A26 154 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 INTS10Q9NVR2 710 aaKnown RBP13.97□□□□□ -0.17
SCAF4-202ENST00000399804 DNAJC28Q9NX36 388 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 WNT6Q9Y6F9 365 aa13.97□□□□□ -0.17
SCAF4-202ENST00000399804 SEC24DO94855 1032 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 FKBP9O95302 570 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 WASP42768 502 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms