RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SMPD4Q9NXE4 827 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RPS6KB2Q9UBS0 482 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ANGPT4Q9Y264 503 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 MYH15Q9Y2K3 1946 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 KCNU1A8MYU2 1149 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 TULP3O75386 442 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PIGRP01833 764 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 SMIM10L2AP0DMW4 78 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 SMIM10L2BP0DMW5 78 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PKMP14618 531 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 SLC26A3P40879 764 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CRATP43155 626 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RPS9P46781 194 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 SNRPD1P62314 119 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 CAP1Q01518 475 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 BNC1Q01954 994 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ERICH5Q6P6B1 374 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 KLHL17Q6TDP4 642 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 SCIMPQ6UWF3 145 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 NEK10Q6ZWH5 1172 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ZNF567Q8N184 647 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PSMA8Q8TAA3 256 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PANX1Q96RD7 426 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RBM4BQ9BQ04 359 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 RBM4Q9BWF3 364 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 CXorf21Q9HAI6 301 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ADGRE2Q9UHX3 823 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PSME2Q9UL46 239 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CNTN6Q9UQ52 1028 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 A0A0G2JMZ2 1700 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 SLC15A5A6NIM6 579 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PRMT5O14744 637 aaPredicted RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 FFAR3O14843 346 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 GPR42O15529 346 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RPP40O75818 363 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 WARSP23381 471 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 SCNN1AP37088 669 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 GSTM5P46439 218 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 C6orf52Q5T4I8 152 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 VWA5B1Q5TIE3 1220 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ANXA8L1Q5VT79 327 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 TRIM40Q6P9F5 258 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CERS6Q6ZMG9 384 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 R3HCC1LQ7Z5L2 792 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 ZC3H3Q8IXZ2 948 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 C10orf53Q8N6V4 93 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ZNF781Q8N8C0 355 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PHF10Q8WUB8 498 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 LINGO1Q96FE5 620 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 C1orf21Q9H246 121 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ATP13A3Q9H7F0 1226 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CREBZFQ9NS37 354 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 UBAP1Q9NZ09 502 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 IFT80Q9P2H3 777 aaPredicted RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 PRKAG3Q9UGI9 489 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 DPP7Q9UHL4 492 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 TCAF1Q9Y4C2 921 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 LRRC42Q9Y546 428 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PCDHB1Q9Y5F3 818 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 MYH10P35580 1976 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 DOCK3Q8IZD9 2030 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 MYH7BA7E2Y1 1941 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 SMIM28A0A1B0GU29 152 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 SMIM35A0A1B0GVV1 85 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 TRIM43BA6NCK2 446 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 CLDN5O00501 218 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 SNPHO15079 494 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 PAGE1O75459 146 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 THRBP10828 461 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 DARSP14868 501 aaKnown RBP8.36□□□□□ -1.07
VPS36-201ENST00000378060 GNPDA1P46926 289 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 GALK1P51570 392 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 POLR2JP52435 117 aaKnown RBP8.36□□□□□ -1.07
VPS36-201ENST00000378060 MRPS6P82932 125 aaKnown RBP8.36□□□□□ -1.07
VPS36-201ENST00000378060 LCP2Q13094 533 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 NDUFA5Q16718 116 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 HSDL1Q3SXM5 330 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 IKBIPQ70UQ0 350 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 PHACTR4Q8IZ21 702 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 CBR4Q8N4T8 237 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 ZNF614Q8N883 585 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 OMA1Q96E52 524 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 COX4I2Q96KJ9 171 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 SLC25A51Q9H1U9 297 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 CD320Q9NPF0 282 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 STARD7Q9NQZ5 370 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 SPATA2Q9UM82 520 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 DOLKQ9UPQ8 538 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 LCTP09848 1927 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 ANKDD1BA6NHY2 528 aa8.36□□□□□ -1.07
VPS36-201ENST00000378060 SAGE2PA6NJ88 616 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms