RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 A0A1W2PQ67 120 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 TCAF2A6NFQ2 919 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 DNAJA2O60884 412 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SERPINI2O75830 405 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SULT2A1Q06520 285 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 IL10RBQ08334 325 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 FSTL1Q12841 308 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SPIDRQ14159 915 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 RD3Q7Z3Z2 195 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 PDE4DIPQ5VU43 2346 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 NT5C1B-RDH14C9J2C7 533 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 H3BNX3 289 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SYN3O14994 580 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 UMPSP11172 480 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 CXCR3P49682 368 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 CCL23P55773 120 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 CLCQ05315 142 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 RALGDSQ12967 914 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 TRIM25Q14258 630 aaKnown RBP17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 RAET1GQ6H3X3 334 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 UBE2R2Q712K3 238 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 CLN6Q9NWW5 311 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SQORQ9Y6N5 450 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 NPEPPSL1A6NEC2 478 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ACSL4O60488 711 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ASGR1P07306 291 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 FAM163BP0C2L3 166 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 NOGQ13253 232 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 GPR107Q5VW38 600 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 TXNRD3NBQ6F5E7 133 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZC3H7AQ8IWR0 971 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 PLEKHO2Q8TD55 490 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ROPN1LQ96C74 230 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 AGAP2Q99490 1192 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 SMAD5Q99717 465 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 LRTM1Q9HBL6 345 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ADGRE2Q9UHX3 823 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZNF536O15090 1300 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 SEC24AO95486 1093 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 KCTD21Q4G0X4 260 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 KBTBD2Q8IY47 623 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 UBR7Q8N806 425 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 GPR156Q8NFN8 814 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ENKURQ8TC29 256 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 TSSK3Q96PN8 268 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 FCRL5Q96RD9 977 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 POMPQ9Y244 141 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 NCKAP1Q9Y2A7 1128 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 SUV39H1O43463 412 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 KIR3DL1P43629 444 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ATXN1P54253 815 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ABRQ12979 859 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 ANGPT1Q15389 498 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 SERPINA13PQ6UXR4 307 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 LRRC15Q8TF66 581 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 DCAKDQ8WVC6 231 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 HAPLN3Q96S86 360 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 OLFM1Q99784 485 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 TDRD1Q9BXT4 1180 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 NUDT4Q9NZJ9 180 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 RBPJLQ9UBG7 517 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 HMGXB4Q9UGU5 601 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 BTBD3Q9Y2F9 522 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 GLYATL1P3A0A0U1RQE8 302 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 LGR5O75473 907 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 SLC25A14O95258 325 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 EPORP19235 508 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 CORO1AP31146 461 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 EIF2B2P49770 351 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 PRKAG1P54619 331 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 BRSK1Q8TDC3 778 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 FUBP3Q96I24 572 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 MRPS23Q9Y3D9 190 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 TIMM22Q9Y584 194 aa17.03■□□□□ 0.32
TRAPPC11-201ENST00000334690 PIPSLA2A3N6 862 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 UROSP10746 265 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 GABRR2P28476 465 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 TLX1P31314 330 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 GUCA1AP43080 201 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 CACNG1Q06432 222 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZHX1-C8orf76Q96EF9 292 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 PDE9AO76083 593 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 OGNP20774 298 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 MAPK9P45984 424 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 CDH4P55283 916 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 VPS26BQ4G0F5 336 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 LDB1Q86U70 411 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZNF483Q8TF39 744 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 TWNKQ96RR1 684 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 BCO2Q9BYV7 579 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 HDHD2Q9H0R4 259 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 CRNNQ9UBG3 495 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 ERGIC3Q9Y282 383 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 SLC9A8Q9Y2E8 581 aa17.02■□□□□ 0.32
TRAPPC11-201ENST00000334690 G3V2T6 193 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms