RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 IFITM3Q01628 133 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 EN1Q05925 392 aaPredicted RBP8.51□□□□□ -1.05
CHD2-226ENST00000636881 FOXM1Q08050 763 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 KIAA0408Q6ZU52 694 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 HDAC2Q92769 488 aaKnown RBP8.51□□□□□ -1.05
CHD2-226ENST00000636881 TMEM125Q96AQ2 219 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 VAT1Q99536 393 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 FICDQ9BVA6 458 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 TRIM54Q9BYV2 358 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 USP21Q9UK80 565 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 VWA7Q9Y334 891 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 SSC5DA1L4H1 1573 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 SCN1AP35498 2009 aa8.51□□□□□ -1.05
CHD2-226ENST00000636881 A0A087WZ62 844 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 SYCE1LA8MT33 242 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 FAM72CH0Y354 149 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 UBFD1O14562 309 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 PPEF2O14830 753 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PIP5K1BO14986 540 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 UGT2B11O75310 529 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 STAU1O95793 577 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 LBPP18428 481 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 BDNFP23560 247 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ALDH4A1P30038 563 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 BACE1P56817 501 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 GRB7Q14451 532 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 MEP1AQ16819 746 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 LY6KQ17RY6 165 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 FAM72AQ5TYM5 149 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 FAM72DQ6L9T8 149 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 FAM72BQ86X60 149 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 DNERQ8NFT8 737 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 GABPB2Q8TAK5 448 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 TMBIM1Q969X1 311 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 TEKT5Q96M29 485 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ALG9Q9H6U8 611 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 MID1IP1Q9NPA3 183 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 GDAP2Q9NXN4 497 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 KLQ9UEF7 1012 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 SLC2A6Q9UGQ3 507 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PCDHGA11Q9Y5H2 935 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PTGDR2Q9Y5Y4 395 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 IGKV6-21A0A0C4DH24 114 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ASNA1O43681 348 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 CRCPO75575 148 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PCNAP12004 261 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 HGFP14210 728 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 IMPDH1P20839 514 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 APLP1P51693 650 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 YBX1P67809 324 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 CLCQ05315 142 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 GALNT1Q10472 559 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 C6orf141Q5SZD1 244 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 METTL7BQ6UX53 244 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 CNTN4Q8IWV2 1026 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 DCP1BQ8IZD4 617 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 RYBPQ8N488 228 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 SPATA22Q8NHS9 363 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 SLC2A14Q8TDB8 520 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PTCD2Q8WV60 388 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 TWIST2Q8WVJ9 160 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 HTRA1Q92743 480 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 WNT8BQ93098 351 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 MUL1Q969V5 352 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 FKBP10Q96AY3 582 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 TSPAN17Q96FV3 270 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 HSFY1Q96LI6 401 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 FDXACB1Q9BRP7 624 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 IFT52Q9Y366 437 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 NME7Q9Y5B8 376 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 CITO14578 2027 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ZNF99A8MXY4 864 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 H3BMM5 538 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 UBXN8O00124 270 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 MAN1A2O60476 641 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 INMTO95050 263 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 BMP4P12644 408 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ILF2Q12905 390 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 TOP3AQ13472 1001 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 FSCN1Q16658 493 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 CLPPQ16740 277 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 KYAT1Q16773 422 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 SPATS1Q496A3 300 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ATAD3BQ5T9A4 648 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 SLC16A12Q6ZSM3 486 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 KDELC2Q7Z4H8 507 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 RAB44Q7Z6P3 723 aaPredicted RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 UNC93AQ86WB7 457 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 NPWQ8N729 165 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 ZNF280CQ8ND82 737 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 PAPD5Q8NDF8 572 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 PSMA8Q8TAA3 256 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 VPS33AQ96AX1 596 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 VMP1Q96GC9 406 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 CELF6Q96J87 481 aaKnown RBP8.5□□□□□ -1.05
CHD2-226ENST00000636881 TMEM74Q96NL1 305 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 NODALQ96S42 347 aa8.5□□□□□ -1.05
CHD2-226ENST00000636881 TOR3AQ9H497 397 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms