RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SEPT10Q9P0V9 454 aa17.54■□□□□ 0.4
SHKBP1-203ENST00000594298 SEPT3Q9UH03 358 aa17.54■□□□□ 0.4
SHKBP1-203ENST00000594298 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-203ENST00000594298 COL6A6A6NMZ7 2263 aa17.54■□□□□ 0.4
SHKBP1-203ENST00000594298 SETXQ7Z333 2677 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 A0A1W2PQ67 120 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 PRSS38A1L453 326 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 B4DGG1 531 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 NRDCO43847 1150 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 KRT1P04264 644 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 TNNT1P13805 278 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 ITIH1P19827 911 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 MX2P20592 715 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 HSPA9P38646 679 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 SCNN1BP51168 640 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 B4GALNT1Q00973 533 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 ARHGEF7Q14155 803 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 LBRQ14739 615 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 CLPPQ16740 277 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 ARHGAP36Q6ZRI8 547 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 ZNF438Q7Z4V0 828 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 TMEM139Q8IV31 216 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 SFTPA2Q8IWL1 248 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 CCL4L1Q8NHW4 92 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 GPBAR1Q8TDU6 330 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 COQ10AQ96MF6 247 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 NSMCE3Q96MG7 304 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 ZNF830Q96NB3 372 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 CYP4F12Q9HCS2 524 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 KCTD5Q9NXV2 234 aa17.53■□□□□ 0.4
SHKBP1-203ENST00000594298 PRAMEF33A0A0G2JMD5 474 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 HTRA2O43464 458 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 SLC28A2O43868 658 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 MAFKO60675 156 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 PRAMEF10O60809 474 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 MYCLP1P12525 358 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 CCNB1P14635 433 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 CD82P27701 267 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 SRSF6Q13247 344 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 ZNF235Q14590 738 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 NR1D2Q14995 579 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 NCBP2-AS2Q69YL0 99 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 TIGD7Q6NT04 549 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 TMPRSS9Q7Z410 1059 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 DTX1Q86Y01 620 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 PELI3Q8N2H9 469 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 ACRBPQ8NEB7 543 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 COL26A1Q96A83 441 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 TEX101Q9BY14 249 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 CLMPQ9H6B4 373 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 B4GALT6Q9UBX8 382 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 TFR2Q9UP52 801 aa17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 FLNBO75369 2602 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-203ENST00000594298 LRRK1Q38SD2 2015 aa17.52■□□□□ 0.39
SHKBP1-203ENST00000594298 KIF26BQ2KJY2 2108 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 C9orf172C9J069 976 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 SOCS5O75159 536 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 CPNE6O95741 557 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 ETV5P41161 510 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 GALNT2Q10471 571 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 ACOX1Q15067 660 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 MARC1Q5VT66 337 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 RFX6Q8HWS3 928 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 TP53INP2Q8IXH6 220 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 RCOR2Q8IZ40 523 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 CBARPQ8N350 705 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 PAF1Q8N7H5 531 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 USP7Q93009 1102 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 NUS1Q96E22 293 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 SEMA6CQ9H3T2 930 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 GRPEL1Q9HAV7 217 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 PHPT1Q9NRX4 125 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 WDR70Q9NW82 654 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 TRNAU1APQ9NX07 287 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 FOXJ2Q9P0K8 574 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 HYOU1Q9Y4L1 999 aa17.51■□□□□ 0.39
SHKBP1-203ENST00000594298 RCCD1A6NED2 376 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 A8MX80 341 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 APOL1O14791 398 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 ARHGAP6O43182 974 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 B4GAT1O43505 415 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 MFSD11O43934 449 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 ZRANB2O95218 330 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 WISP1O95388 367 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 PEX11BO96011 259 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 FGF1P05230 155 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 CEACAM5P06731 702 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 CR2P20023 1033 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 CCNCP24863 283 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 TEAD1P28347 426 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 GARSP41250 739 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 KCNC4Q03721 635 aa17.5■□□□□ 0.39
SHKBP1-203ENST00000594298 SLC10A7Q0GE19 358 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms