RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 HNRNPA2B1P22626 353 aaKnown RBP17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 DPP6P42658 865 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 CCDC25Q86WR0 208 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 DEFB119Q8N690 84 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 FAM174AQ8TBP5 190 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 STYXQ8WUJ0 223 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 UBLCP1Q8WVY7 318 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 KLF6Q99612 283 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 FOXP3Q9BZS1 431 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 MRM3Q9HC36 420 aaKnown RBP17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 COQ6Q9Y2Z9 468 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 ARL5AQ9Y689 179 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 R4GN57 208 aa17.03■□□□□ 0.32
RPRD1A-209ENST00000590898 MEI4A8MW99 385 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 SLC31A1O15431 190 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 AVILO75366 819 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 SYF2O95926 243 aaKnown RBP17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 HADHAP40939 763 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 ETV3P41162 512 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 PTGER3P43115 390 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 DCDC1P59894 354 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 LRRC14Q15048 493 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 SKIDA1Q1XH10 827 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 LYSMD4Q5XG99 296 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 DENND2CQ68D51 928 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 IQCKQ8N0W5 287 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 OR2W6PQ8NHA6 318 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 C1orf216Q8TAB5 229 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 KLK6Q92876 244 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 LRRC39Q96DD0 335 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 SIGLEC10Q96LC7 697 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 PLEKHG4BQ96PX9 1271 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 KIFC1Q9BW19 673 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 EPB41L4BQ9H329 900 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 FAM83DQ9H4H8 585 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
RPRD1A-209ENST00000590898 ZNF106Q9H2Y7 1883 aaKnown RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 MGAT1P26572 445 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 AKT2P31751 481 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 DHPSP49366 369 aaPredicted RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 ARL4CP56559 192 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 HIF1AQ16665 826 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 WSCD2Q2TBF2 565 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 DNAJC21Q5F1R6 531 aaKnown RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 TP53I13Q8NBR0 393 aaPredicted RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 TMEM145Q8NBT3 493 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 PPHLN1Q8NEY8 458 aaKnown RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 NUS1Q96E22 293 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 PHACTR1Q9C0D0 580 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 LRRC4CQ9HCJ2 640 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 MTRF1LQ9UGC7 380 aaKnown RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 RAB23Q9ULC3 237 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 PLAAQ9Y263 795 aa17.02■□□□□ 0.31
RPRD1A-209ENST00000590898 PYGLP06737 847 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 BPIP17213 487 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 HOXD12P35452 270 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 ZNF140P52738 457 aaPredicted RBP17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 RACK1P63244 317 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 ESRP1Q6NXG1 681 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 PRR23BQ6ZRT6 265 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 RGL4Q8IZJ4 473 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 OR4K2Q8NGD2 314 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 NAT9Q9BTE0 207 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 ABCG8Q9H221 673 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 NLE1Q9NVX2 485 aaPredicted RBP17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 SOX13Q9UN79 622 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 HCN4Q9Y3Q4 1203 aa17.01■□□□□ 0.31
RPRD1A-209ENST00000590898 BPTFQ12830 3046 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 E7ESA3 106 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 H7C0S8 307 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 TOR1BO14657 336 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 EIF3HO15372 352 aaKnown RBP eCLIP17■□□□□ 0.31
RPRD1A-209ENST00000590898 TEAD1P28347 426 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 NBL1P41271 181 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 FNBP1LQ5T0N5 605 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 TSTD2Q5T7W7 516 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 HENMT1Q5T8I9 393 aaKnown RBP17■□□□□ 0.31
RPRD1A-209ENST00000590898 SNX19Q92543 992 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 AP2M1Q96CW1 435 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 SERAC1Q96JX3 654 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 TSPYL1Q9H0U9 437 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 CHRAC1Q9NRG0 131 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 SYBUQ9NX95 663 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 SAMD15Q9P1V8 674 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 APPL1Q9UKG1 709 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 PILRBQ9UKJ0 227 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 FAM237BA0A1B0GVD1 139 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 FPGTO14772 594 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 RRP9O43818 475 aaKnown RBP17■□□□□ 0.31
RPRD1A-209ENST00000590898 ITPKAP23677 461 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 PMS2P54278 862 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 ACVR1Q04771 509 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 OVGP1Q12889 678 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 SEPT6Q14141 434 aa17■□□□□ 0.31
RPRD1A-209ENST00000590898 STAT4Q14765 748 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms