RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CPT1BQ92523 772 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SLC38A3Q99624 504 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 MECRQ9BV79 373 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 CRTAC1Q9NQ79 661 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SIX4Q9UIU6 781 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 A0A1W2PPM1 405 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ALOX15BO15296 676 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 UBOX5O94941 541 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 RAD21L1Q9H4I0 556 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 PIRO00625 290 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SNAP91O60641 907 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 CDH3P22223 829 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 UBXN11Q5T124 520 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 LIPMQ5VYY2 423 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 Q6ZVU0 165 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 CPNE8Q86YQ8 564 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SIDT2Q8NBJ9 832 aaKnown RBP17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SLC22A17Q8WUG5 538 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 NACC2Q96BF6 587 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 PGM2Q96G03 612 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 PAAF1Q9BRP4 392 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 GTPBP2Q9BX10 602 aaKnown RBP17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ACSS3Q9H6R3 686 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ZNF780BQ9Y6R6 833 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 CNPP09543 421 aaKnown RBP17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ACVRL1P37023 503 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ENPP7Q6UWV6 458 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SIPA1Q96FS4 1042 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 NSMCE2Q96MF7 247 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 FAM237BA0A1B0GVD1 139 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ALPIP09923 528 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ALPPL2P10696 532 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 NQO1P15559 274 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 KCNA5P22460 613 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ESRP1Q6NXG1 681 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 CRELD2Q6UXH1 353 aaPredicted RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 PLD3Q8IV08 490 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 CMTR2Q8IYT2 770 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ZFP28Q8NHY6 868 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 OR2AG1Q9H205 316 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 RHOJQ9H4E5 214 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 RXFP1Q9HBX9 757 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 DDX60Q8IY21 1712 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 RHOP08100 348 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 CDH13P55290 713 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 FAM98BQ52LJ0 330 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 EOGTQ5NDL2 527 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 FAM182AQ5T1J6 154 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 PROX1Q92786 737 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 MFSD3Q96ES6 412 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 MIOSQ9NXC5 875 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 FAM220BPB1ANY3 271 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 TTYH3Q9C0H2 523 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 TMED1Q13445 227 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 HNRNPDQ14103 355 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 TTMPQ5BVD1 217 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 FBXO48Q5FWF7 155 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 CYP2R1Q6VVX0 501 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 SIKE1Q9BRV8 207 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 LRRC4CQ9HCJ2 640 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 SLC40A1Q9NP59 571 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 USE1Q9NZ43 259 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ZNF711Q9Y462 761 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 SAC3D1A6NKF1 404 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 TAF1AQ15573 450 aaPredicted RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 GSTA3Q16772 222 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 TMEM26Q6ZUK4 368 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 PPP3R2Q96LZ3 170 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 ATG10Q9H0Y0 220 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 KCND1Q9NSA2 647 aa17.29■□□□□ 0.36
PTPN21-208ENST00000556564 PPIEQ9UNP9 301 aaKnown RBP17.29■□□□□ 0.36
PTPN21-208ENST00000556564 MYBL2P10244 700 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 GSSP48637 474 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 GDF10P55107 478 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 TMEM237Q96Q45 408 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 DZANK1Q9NVP4 752 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 LYPLA1O75608 230 aaPredicted RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 LRPAP1P30533 357 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 CHRNA4P43681 627 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 UBE3AQ05086 875 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 ZBTB17Q13105 803 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 AMZ1Q400G9 498 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 TSTD2Q5T7W7 516 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 HOXD13P35453 343 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 SOX4Q06945 474 aaPredicted RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 FAAH2Q6GMR7 532 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 PTCD2Q8WV60 388 aaKnown RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 AIF1LQ9BQI0 150 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 SUV39H2Q9H5I1 410 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 J3KR12 359 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 UBTFL6P0CB48 400 aaPredicted RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 DPYSL2Q16555 572 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 DHFR2Q86XF0 187 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 CAMK1DQ8IU85 385 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 PCDH20Q8N6Y1 951 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms